Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01828 ATGTTTAGTTACGATTTTGGAGATGATATGCCTCGCCTTGCGAATTTGGTTGATATTcatggaaatcaatttgaaattttggttgATAAGGTTGATGGAAATTTATACCTCACACGTGGGTGGCGATTTATTCGCGATTTCTATGATCTTAGAGTAGGCGCTTGGTTGGTTTTAGTATACACCGGTGAGGGACAATTTAGTCTGACTATCCAAGACCGATTTCATCATATATTAACTCCTCCTATTTTTGTGCCACCGgcaaaatttgttatatataagGACGACCTCACTCCCTTTTTTGTTAACAATTTACCTCCCTCAATCAAGTTGTTGGCTTACTCTCATGATCAATCGTGTTTTCACATTTCATACGAGAAAGCATTAACCTATCACGATATTACAACCGGGTTCTTGATTTTGCCGTATGATGGCTTTGGTGAACACGCTGTTCGATGCAACAACTACTTCCATAATTTTGGTGGATGA 486 0.3601 MFSYDFGDDMPRLANLVDIHGNQFEILVDKVDGNLYLTRGWRFIRDFYDLRVGAWLVLVYTGEGQFSLTIQDRFHHILTPPIFVPPAKFVIYKDDLTPFFVNNLPPSIKLLAYSHDQSCFHISYEKALTYHDITTGFLILPYDGFGEHAVRCNNYFHNFGG 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01828 161 SUPERFAMILY DNA-binding pseudobarrel domain 2 72 IPR015300 -
Tsu02g01828 161 Gene3D - 1 74 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01828 Tsu-Chr2 16550192 16550780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01828 6 74 REM Transcription Factor Family AT3G53310 28.986 6.62e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01828 - K05689 mtr:MTR_2g038740 144.436