Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01816 ATGCATGGGAGGTACCTTGATGTGCCGAGGGAGAAGAGAAGTTTGGATTCGAGTTCCGGTGATGATGGACAGCCTGATCGGAAACGACCTGCTTTGGCTAGtGTAATTGTTGAAGCCTTGAAGGTGGATAGTCTGCAGAAACTGTGTTCATCACTGGAACCTATTCTACGCAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTGGCAAAACTAGGTCCAACCAAGCTTAATGGGAGGTCTTCTCCAAAGCGCATAGAAAACTCTGATGGCAAAAATTTACAATTGCACTTCAAGACCAGACTATCCCTTCCCCTTTTTACTGGTGGGAAAGTGGAGGGTGAACAAGGGGCAGCCATACATATCGTTTTGGTTGATGCAAACTCAGGCCAAGTTGTCACATCAGGCCCAGAGTCATGTGCCAAACTAGATGTCTTTGTTCTTGAGGGGGATTTCAATAATGAGGATGACGAAAATTGGGGCGAAGAAGAGTTTGAGAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGGCCTCTTCTGTCTGGCGATCTGCAAGTCATACTAAAGGAAGGTGTAGGGACACTGGGTGAGCTCTCATTTACTGACAACTCCAGCTGGATAAGGAGTAGGAAGTTCAGATTGGGGCTGAAAGTTGCCCCAGGTTTTGGTGAAGGAATGCGTATTCGTGAAGCCAAATCAGAAGCTTTCACTGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTATCCACCTGCCTTGCATGATGAGGTTTGGAGACTGGAGAAGATTGGTAAGGATGGTTCCTTTCACAAAAGGCTAAACAAAGCAGGAATATATAATGTTGAAGACTTTCTAAGACTTGTGATCAGAGACTCTCAGAGATTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATATCCTTGTTGAGCACGCAAAGACTTGTGTACTCGGTGGAAAACTCTATGTATATTATCCCGAGGATGCAAGAAACGTTGGTGTTGTTTTCAATCACATTTATGAATTGAGCGGCTTAATTGCCAATGACCAGTATTGCTCAGCTGATTCTCTCTCTGAGAGTCAAAAGGTTTATGTAGACACGTTGGTGAAGCAAGCATATGATAATTGGATGCATGTTATCGAGTATGATGGGAAGTCTCTACTAAATAACAATCAAGATCAAAATTTGGATACTGCTCATCCTCAAGCTCTCATGGGTTCCCTTGAGTACCCAAACTCAATTCAGCAGACTTCTATCCATAGTTTGCCACAACCAGAACATACAGGCCAACCTTCAATGGATACAGGAGCAACAGTTGGAGGTATATATTTCCTTGCAAAACATTATTATATTAGCAACAAAATCCATGTCAACCTGCAAACTGTTTCGCTCAATAGATTTTTTGCAGTTGGAGAATTTTTCAATTGCTGA 1440 0.4292 MHGRYLDVPREKRSLDSSSGDDGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPTKLNGRSSPKRIENSDGKNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIVLVDANSGQVVTSGPESCAKLDVFVLEGDFNNEDDENWGEEEFESHIVKEREGKRPLLSGDLQVILKEGVGTLGELSFTDNSSWIRSRKFRLGLKVAPGFGEGMRIREAKSEAFTVKDHRGELYKKHYPPALHDEVWRLEKIGKDGSFHKRLNKAGIYNVEDFLRLVIRDSQRLRNILGSGMSNKMWDILVEHAKTCVLGGKLYVYYPEDARNVGVVFNHIYELSGLIANDQYCSADSLSESQKVYVDTLVKQAYDNWMHVIEYDGKSLLNNNQDQNLDTAHPQALMGSLEYPNSIQQTSIHSLPQPEHTGQPSMDTGATVGGIYFLAKHYYISNKIHVNLQTVSLNRFFAVGEFFNC 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01816 479 MobiDBLite consensus disorder prediction 1 30 - -
Tsu02g01816 479 Pfam Calmodulin binding protein central domain 252 318 IPR046830 -
Tsu02g01816 479 Pfam Calmodulin binding protein C-terminal domain 323 385 IPR046829 -
Tsu02g01816 479 PANTHER OS02G0177800 PROTEIN 8 445 IPR012416 GO:0005516
Tsu02g01816 479 PANTHER CALMODULIN-BINDING PROTEIN 8 445 - -
Tsu02g01816 479 Pfam Calmodulin binding protein-like N-terminal domain 93 240 IPR046831 -
Tsu02g01816 479 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01816 Tsu-Chr2 16451334 16455737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01816 21 413 Calmodulin-binding Proteins AT4G25800 76.203 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01816 - - gmx:100812605 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01816 02 16451334 16455737 Tsu08g04163 08 59789476 59795009 PCT