Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01794 ATGGGTGAAGAAGATTTAATCGGAGATTCTCAATTAGCGGGTGTACCCACCGGAGCTTATCGTCTCCGGCGAGCTGTGGAGCTTATTTGTTCGTTGCTATCTCTTTCTCTTTCGATTAGGGTCTTCGCCGGAAAATGGCAACTCATTCGTAACAAGCTTGAAGAACTTCATTCTGGTTTAATCGCCGCTGAGAATTGTGATTCCGGTGAAAATCCGTCGCTTTCTAGGTTAGTTACTTTGATAGTAGCGACGGTTAATGAGTGTCACGATCTGGGTCAGCGTTGTGTCGATGTTTCGTATAGTGGGAAGCTTTTGATGCAGAGTGATTTAGACGTAGCGTTTGCGAAACTTGATGGTTTAGCGAAGAAGCTTTCTGAGATATACAAAACGGGTCTTTTAACAAATGGGTTTGCGCTTGTTGTTTCAAAACCGTGTCTTGGTGCTTGTAAAGAGGATATGAGGTTTTATGTGAGAGATGTTTTGACGAGGATGAAGATTGGTGATTTGGGTATGAAGAAACAAGCTTTGAGGAATCTTCTTGAGGTTGTTGTTGAGGATGAGAAGTATGTGAAGGTTATTGTTGTTGATGTGAGTGATGTTGTTCATGTTCTTGTTGGGTTTTTGGGTTCTGCTGAGGTGGAAATTCAAGAGGAGAGTGCTAAGGTTGTTTCTGTTGTTGCTggttttgattcatataaaggGGTTTTGATTAGTGCTGGTGTTATTGCGCCTTTGATTCGTGTTTTGGATTGTGGGAGTGAGTTAGGGAAAGTTGCGTCTGCGAggtgtttgatgaaattgaCTGAGAATTCGGATAATGCTTGGGCTGTTTCTGCTCATGGTGGTGTTACTGCTTTGTTGAATATTTGTGGGAATGATGATTGTAAAGGGGATTTGGTTGGTTTTGCTTGTGGGGTGTTGAGAAATCTTGTTGGTGTTGAGGAAGTTAAGAGGTTTATGGTTGAGGAGGATGCGGTGTCGACGTTTATCAGGCTTGTGAAATCAAAGGAGGAAGCAATTCAGGTGAATTCAATAGGGTTCATTCAGAATATTGCCTTTGGAGATGAAGTGATTAGACAAATGGTGATTAGAGAAGGCGGAATCCGTGCTTTGTTACGCGTTTTGGATCCTAAATGGTCCTATTCGTCGAAAACAAAGGAAATAGCAATGAGGGCTATTGAGAGTTTGTGTTTTACTTCATCTAGTTCTGTAAGTATTTTAATGAGTTATGGTTTTGTGGATCAGTTGTTATATTATGTTCGAAACGGTGAAGTTTCAATTCAAGAATTGGCATTGAAAGTGGCATTTAGATTATCAGGAACATCTGAAGAAGCTAAGAAAGCAATGGGTGATTCTGGTTTTATGGCAGAATTTGTTAAGTTTCTGAATGCAAAATCATTCGAAGTTCGCGAAATGGCAGCCGAGGCACTCTCTGGCATGGTCACGGTACCTAAAAACCGGAAGAGATTTGTGCAAGACGACAATAACATAGCCCTACTTCTTCAATTACTTGATCCAGAAGAAGGAAATTCAGGTAACAAAAAGTTCTTAATCTCAATTTTATCATCATTGACAAGTTGCAATAGTGGAAGGAAAAAGATTGTTAGTTCTGGATATGCAAAAAACATAGACAAATTAGCAGAAGCTGAAGTTTCTTCTGATGCTAAAAAACTTGTCAAGAAACTATCCACAAACAGATTTCGCAGTATGTTGAATGGAATATGGCACTCATGA 1734 0.3939 MGEEDLIGDSQLAGVPTGAYRLRRAVELICSLLSLSLSIRVFAGKWQLIRNKLEELHSGLIAAENCDSGENPSLSRLVTLIVATVNECHDLGQRCVDVSYSGKLLMQSDLDVAFAKLDGLAKKLSEIYKTGLLTNGFALVVSKPCLGACKEDMRFYVRDVLTRMKIGDLGMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSAEVEIQEESAKVVSVVAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVASARCLMKLTENSDNAWAVSAHGGVTALLNICGNDDCKGDLVGFACGVLRNLVGVEEVKRFMVEEDAVSTFIRLVKSKEEAIQVNSIGFIQNIAFGDEVIRQMVIREGGIRALLRVLDPKWSYSSKTKEIAMRAIESLCFTSSSSVSILMSYGFVDQLLYYVRNGEVSIQELALKVAFRLSGTSEEAKKAMGDSGFMAEFVKFLNAKSFEVREMAAEALSGMVTVPKNRKRFVQDDNNIALLLQLLDPEEGNSGNKKFLISILSSLTSCNSGRKKIVSSGYAKNIDKLAEAEVSSDAKKLVKKLSTNRFRSMLNGIWHS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01794 577 SMART arm_5 229 269 IPR000225 GO:0005515
Tsu02g01794 577 SMART arm_5 270 312 IPR000225 GO:0005515
Tsu02g01794 577 SMART arm_5 313 353 IPR000225 GO:0005515
Tsu02g01794 577 SMART arm_5 442 482 IPR000225 GO:0005515
Tsu02g01794 577 SMART arm_5 186 228 IPR000225 GO:0005515
Tsu02g01794 577 SMART arm_5 354 398 IPR000225 GO:0005515
Tsu02g01794 577 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 281 325 IPR000225 GO:0005515
Tsu02g01794 577 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 19 577 - -
Tsu02g01794 577 Gene3D - 156 566 IPR011989 -
Tsu02g01794 577 SUPERFAMILY ARM repeat 153 546 IPR016024 -
Tsu02g01794 577 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 19 577 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01794 204 434 U-box Gene Family AT3G54790 25.957 1.57e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01794 - - gmx:100809382 867.455