Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01783 ATGGGCAAGATCATAGGATTCAAAGTTTCATTCTTTATGTCGTTGTTGTTGTATTTCCTCTGTTTCCTCTGTTTTTATCCTCTGTTTTTGCATGCAGCGAATTCGATTGCACAGAATGAATCTATCAAAGATGGTTCCACTTTGGTTTCAGATGGTCTCAAATTCGAAATGGGTTTCTTCAGTTTGAATGATTCTTCTTCAAGATACGTTGGAATTTGGTATCACAACGTTGCTTCAGCTTATGTATGGGTTGCAAATAGAGAAAAACCTATCAAAAACAGAGAAGGGtctattacaataaaaaatgatgGAAACTTGGTTGTTATTGATGGAGAAAACAATGAGATTTGGTCGAGTAACGTATCAAAAACACCGATAAATAACTCACAAGTTGTTCTTCATGATGATGGAAATCTTATTCTTTCAGATAGAGAAGTTGGAAAAGATATTTGGCAAAGTTTTGAAGATCCAACTGATACATATCTTCCTGATATGAAAGTTCCGGCAAGCGGTGGAAGTGGAATTGGAAAAGATGCTACTTTTTGTTCATGGAAATCAGAGAATGATCCTTCATTTGGAAACTATTCAATGAATGTTGATTCTGAAGCTTCACCACAGATAGTGAttatggaaggaaaaaaaagaaggtgGAGAAGTGGTTATTGGGATGGTAGAGTTTTCACAGGTGTACCAAATATGACAGGAAATTATCTTTACGGTTTTCGGTTAAACACGGAAGATAATGGAGATAGGTATTTTGTTTATGAAGCATTGAATACTACTGATAAGATAAGGTTTTTGATTAGTTATGATGGATTTGAGAGACAATTTAGGTgggatgaaaatgaaaaaaaatggaatgtGTTACAAAGTGAGCCTATTAAGAAGTGTGAGTTTTATAATTCATGTGGTAGTTTTGCAGTATGTGATGATTCTGATTCAAGTTTATGTAAGTGTATAAAAGGGTTTGAACCAAGGGATATGAATGGTTGGAAAAATGGGAATTGGTCAAAAGGGTGTAAGAGGATGACACCATTGAAGAGTGAGAGAAGTAGTAATAGTTCTGTTGGAGAAGATGGTTTTTTGGTGGAAAGGGATTTGAAGTTACCTGATTTTGCACATTTGGTGAGTGCTGGTGATAGTAAGGATTGTGAAGATAATTGTGTGAAGAATAGTTCTTGTACTGCTTATACATATGCTATTGGAATTGGGTGCATGGTTTGGTTTGGGGAGTTGGTTGATTTTCAAAGGTTAGAAAATTATGCAAATACACTCAACATTCGTCTTGCTGATTCTGATTTAGGTGATGGAGGGAAAAAGACCAAAATTGGGATAATACTAGGTGTTGTGGGGGGGCTTATCTGCCTTGGAATCATTGCATGGCTATTATGGAGGCTTAAGAGAAAACTCAAAGTTTCCTCAACTTCTTCCAACGTTAATGGTGATGTACCAGCTTCTGAACCATACAAGAGTACAAACTTATTACTATCAGCAGAATTATCAGGACCAGGTGGTCTTAGTCCCGACGGGAATCCGCTTAATAATGCAGAACTTTCATTCATCAGTTTTAGTATCATTGTAATAGCAACAAACAATTTTTCAGAAGAAAATAAGCTCGGACAAGGCGGGTTTGGTCCTGTTTACAAGGGAAAGCTTCCTGGGGGAGTAGAAATCGCGGTCAAGAGGCTTTCTAAACAGTCGAACCAAGGCTCAGATGAGTTCAAGAATGAAATGATGCTTATAGCCAAATTACAACATAGAAATCTTGTCAGACTATTGGGATGTTCAGTTGAAGGCGAAGAAAAGTTACTGGTGTATGAGTACATGCCAAACAAAAGTTTGGACCGCTTTCTATTTGATCCAGTCAAGCAAACAATACTAGATTGTACAAAACGTTTTGAAATCATCGAGGGAATTGCAAGAGGACTACTTTATCTGCACCGTGATTCACGGCTTAGAATAATCCATCGTGATCTAAAAGCAAGCAACATTTTGTTGGATGAAAATATGAATCCAAAAATTTCAGATTTCGGCTTGGCTAGGATATTTGAAGGAAACCAAAATGAAGACAATACAGGCAAAATCGTTGGTTCATATGGTTATATGTCTCCAGAATATGCAATGGATGGTCTATTTTCGGTCAAATCTGATGTCTATAGTTTTGGCGTACTACTACTAGAGATTCTTAGTGGTCGCAAAAACACCAGCTTTCGTGATTCTTACGATCCAAGTCTCATAGGATATGCATGGCGTCTATGGAATGAAGAGAATGTAATGGAGCTTATTGATCCTTCGATCCGTGATTCGAGTCCAAAGAGTAAAGCTTTGAGATGCATACACATAGGGATGTTATGCGTGCAAGATTCAGCATCTCGTAGACCAAACATGTCATCCGTGGTGTTGATGCTTGAAAGTGAGGCAACAACTCTTCCTTTGCCTGTCAAACCTTTGATTACTTCCATGAGAAGATATGATGATACAGAAGAATTTCATACTGAACCCTTTGATTCCACAGTTGATCTTACAGTCACAGGGAGATAA 2541 0.366 MGKIIGFKVSFFMSLLLYFLCFLCFYPLFLHAANSIAQNESIKDGSTLVSDGLKFEMGFFSLNDSSSRYVGIWYHNVASAYVWVANREKPIKNREGSITIKNDGNLVVIDGENNEIWSSNVSKTPINNSQVVLHDDGNLILSDREVGKDIWQSFEDPTDTYLPDMKVPASGGSGIGKDATFCSWKSENDPSFGNYSMNVDSEASPQIVIMEGKKRRWRSGYWDGRVFTGVPNMTGNYLYGFRLNTEDNGDRYFVYEALNTTDKIRFLISYDGFERQFRWDENEKKWNVLQSEPIKKCEFYNSCGSFAVCDDSDSSLCKCIKGFEPRDMNGWKNGNWSKGCKRMTPLKSERSSNSSVGEDGFLVERDLKLPDFAHLVSAGDSKDCEDNCVKNSSCTAYTYAIGIGCMVWFGELVDFQRLENYANTLNIRLADSDLGDGGKKTKIGIILGVVGGLICLGIIAWLLWRLKRKLKVSSTSSNVNGDVPASEPYKSTNLLLSAELSGPGGLSPDGNPLNNAELSFISFSIIVIATNNFSEENKLGQGGFGPVYKGKLPGGVEIAVKRLSKQSNQGSDEFKNEMMLIAKLQHRNLVRLLGCSVEGEEKLLVYEYMPNKSLDRFLFDPVKQTILDCTKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFEGNQNEDNTGKIVGSYGYMSPEYAMDGLFSVKSDVYSFGVLLLEILSGRKNTSFRDSYDPSLIGYAWRLWNEENVMELIDPSIRDSSPKSKALRCIHIGMLCVQDSASRRPNMSSVVLMLESEATTLPLPVKPLITSMRRYDDTEEFHTEPFDSTVDLTVTGR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01783 846 Pfam D-mannose binding lectin 81 185 IPR001480 -
Tsu02g01783 846 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 13 844 - -
Tsu02g01783 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Tsu02g01783 846 ProSiteProfiles Bulb-type lectin domain profile. 33 154 IPR001480 -
Tsu02g01783 846 Gene3D Transferase(Phosphotransferase) domain 1 609 810 - -
Tsu02g01783 846 ProSiteProfiles PAN/Apple domain profile. 340 430 IPR003609 -
Tsu02g01783 846 CDD B_lectin 39 157 IPR001480 -
Tsu02g01783 846 Gene3D Phosphorylase Kinase; domain 1 510 608 - -
Tsu02g01783 846 ProSiteProfiles Protein kinase domain profile. 533 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01783 846 CDD STKc_IRAK 539 804 - -
Tsu02g01783 846 Pfam Protein tyrosine and serine/threonine kinase 536 801 IPR001245 GO:0004672|GO:0006468
Tsu02g01783 846 SMART ntp_6 356 429 IPR003609 -
Tsu02g01783 846 PIRSF SRK 7 844 IPR024171 GO:0004674
Tsu02g01783 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 190 IPR036426 -
Tsu02g01783 846 Pfam PAN-like domain 357 414 IPR003609 -
Tsu02g01783 846 Gene3D - 29 154 IPR036426 -
Tsu02g01783 846 SMART blect_4 39 157 IPR001480 -
Tsu02g01783 846 CDD PAN_AP_plant 354 430 - -
Tsu02g01783 846 SMART serkin_6 533 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01783 846 SUPERFAMILY Protein kinase-like (PK-like) 519 829 IPR011009 -
Tsu02g01783 846 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Tsu02g01783 846 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 13 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01783 Tsu-Chr2 15980196 15984003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01783 509 816 Receptor kinase-like Gene Family AT4G23230 60.518 5.46e-128 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu02g01783 PK_Tyr_Ser-Thr 7.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01783 - - mtr:MTR_4g091570 1352.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01783 02 15980196 15984003 Tsu08g04193 08 60139874 60143346 PCT
Tsu08g04192 08 60123721 60135815 Tsu02g01783 02 15980196 15984003 PCT