Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g01778 | atGAAAAGTTTCAGTTTCTCAACACTCTTTCTCTTCTGTTTCTCAACTTCAACCATTTTCTTCTCAACACCTTCAATCtctgcttcttcttctgataCCTTAACAACAACCCAAATCCTTAAAATCAACGAAACCCTCTTGTCACCAACAGGAATTTTCCAACTCAGTTTCTTTTCCTACGACAAATTTTCCTGGTACTTAGGAATACGTTACAACATCGACCATGATAACAGAACAGTGGTTTGGGTTGCAAACAGAAACACCCCAATTCAAAATCCCAATTCCTTTCTCAAATTAACCGACACAGGTCTTATTATCATCGATCAATCCAATAAAACCATCTGGGCTACtgaaaaaatcaataaaaattcaacCTTTAACAAAAACCCAATTCTTCAGATTCTTGATTCTGGGAATTTGGTTATATCAGAATCACCAAATGAGAACGACCCAACGAAGTTTTTATGGcaaagttttgattttccaaCAGATACTTTGTTACCTGGTATGAAACTTGGTTGGAATTTTGATACAAACAGAGAAACACACATAAACTCATGGAAAGTAACAGATCAAGATCCTTCAATTGGAGATATATCTTTCAAGATGGATTATCATGGTGTTCCAGAAATTTTTCTTTGGAACAAAAATAAGAGAGTTTATAGAAGTGGACCATGGAATGGTAAAAGATTCAGTGGTGTACCTGAGATGCAACCATTAAcagattcaattcaattcaGTTTTGTTCAGAATGAACATGAAGTTTACTATACATTTTCAATTGGGAATGAATCATTGTTTTCAAGACTCAGTGTTGATTCATTAGGTGAACTTCAAAGACTTACATGGATACATAGTAGAAAATTTTGGACTAAATTTTGGTATGCACCAAAAGATCAAtgtgataattataaagaatgTGGTCCATTTGGTATATGTGATACAAATGCTTCACCTGTTTGTAATTGTATTAAAGGATTTCATCCTAAGAATCATCAAGCTTGGAATTTGAGAGATGGATCTGATGGATGTTTGAGGGATAATGAATTGGATTGTGTGAGTGATAGGTTTTTACATTTGGTGAATGTGAAATTGCCTGAGACAAGTAGTGTTTTTGTGAATAGAAGTATGAGTTTGGTTGAATGTGGTGATTTGTGTATGAAGAATTGTTCTTGTACTGGTTATGCTAATATTGAGATTGTTAATGGTGGAATTGGTTGTGTTATGTGGCTTGATCAACTTATTGATATTAGAGCTTATCCTGCTGGTGGTCAAGATCTTTTTGTCAGATTATCAGCTTCTGATGTAGATGATGAAGTGCCAAGAGAAAGTTCTGATCGCAAGACAGCTAAGGCTATTGGCATTATGGCTGGGGGTGCAGCTGTTATATTTTTGGCAGTAGGAATATGTTTCTTGTGGAGGAAGAAAAAATTGCAGTTtctattgaatttgaaaagaaagTCAGAAAAAAGAGGTTCATTGGAAAAAAGTCAGGATTTGCTTATAACTGAAGGAGTGTTTACAAGTAATAGAGAACAAtcaagtgaaaataaaatggatgaTCTAGAATTGCCATTCTTTGATTTTAATACCATAACTATGGCTACAAATAATTTCtctgaacaaaataaacttGGACAAGGAGGCTTTGGTATTGTTTACAAAGGTAGGTTGATGGAAGGTCAGGAAATTGCGGTAAAGAGATTATCAAAAAATTCTGGCCAAGGTGTTGAAGAATTTAAAAACGAGGTAAAGTTGATTGTCAAACTTCAACATCGAAACCTTGTTCGGCTACTTGGTTGCAGCTTTCAAATGGATGAAAAAGTGCTAGTTTATGAGTACATGGAAAATAGAAGCCTTGATGCCATTTTGTTTGACAAAGCTAAAAGATCCTCGCTAGACTGGCAAACACGCTTCAACATTATATCAGGAATAGCTAGAGGACTTCTTTATCTTCACCAAGATTCTAGATTTAGGATCATCCATAGAGATCTTAAGGCAAGCAACATTCTACTTGACCGAGAAATGAATCCAAAGATTTCAGATTTTGGAATGGCTAGAATTTTTGGCACGGATCAGGAAGAGGCAAATACAGTTAGAGTCGTTGGAACATACGGCTATATGTCTCCTGAATATGCTATGGATGGAATCTTCTCGGTGAAATCTGATGTTTTTAGTTTCGGCGTTCTCGTGATGGAGATCATAAGTGGGAAAAAGAACCGAGGTTTCTATTCCGCAAACAAAGAATTGAATCTTCTCGGTCATaGTTGGAAGCTTTGGAAAGAAGGAAATGCTTTGGAACTGATTGATTCTTCCATTGATAATTCATATTTACCATCTGAGGTTCTTAGATGCATACAAGTTGGGCTATTATGTGTACAAGAGCGAGCAGAAGATAGACCAACAATGTCTTCAGTGGTGTTGATGTTGAGTAGCGAAACAGCAACAATAGCAGAGCCGAAAAATCCTGGATTTTGCCTAGGAAGTAATCCTATTGAAACTGATTCTTCCTCAAGTAAAAAAGATGAATCTTGCACAGTGAACCAAGTTACTGTCACAATGGTAGATGGCAGATAG | 2577 | 0.3426 | MKSFSFSTLFLFCFSTSTIFFSTPSISASSSDTLTTTQILKINETLLSPTGIFQLSFFSYDKFSWYLGIRYNIDHDNRTVVWVANRNTPIQNPNSFLKLTDTGLIIIDQSNKTIWATEKINKNSTFNKNPILQILDSGNLVISESPNENDPTKFLWQSFDFPTDTLLPGMKLGWNFDTNRETHINSWKVTDQDPSIGDISFKMDYHGVPEIFLWNKNKRVYRSGPWNGKRFSGVPEMQPLTDSIQFSFVQNEHEVYYTFSIGNESLFSRLSVDSLGELQRLTWIHSRKFWTKFWYAPKDQCDNYKECGPFGICDTNASPVCNCIKGFHPKNHQAWNLRDGSDGCLRDNELDCVSDRFLHLVNVKLPETSSVFVNRSMSLVECGDLCMKNCSCTGYANIEIVNGGIGCVMWLDQLIDIRAYPAGGQDLFVRLSASDVDDEVPRESSDRKTAKAIGIMAGGAAVIFLAVGICFLWRKKKLQFLLNLKRKSEKRGSLEKSQDLLITEGVFTSNREQSSENKMDDLELPFFDFNTITMATNNFSEQNKLGQGGFGIVYKGRLMEGQEIAVKRLSKNSGQGVEEFKNEVKLIVKLQHRNLVRLLGCSFQMDEKVLVYEYMENRSLDAILFDKAKRSSLDWQTRFNIISGIARGLLYLHQDSRFRIIHRDLKASNILLDREMNPKISDFGMARIFGTDQEEANTVRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVMEIISGKKNRGFYSANKELNLLGHSWKLWKEGNALELIDSSIDNSYLPSEVLRCIQVGLLCVQERAEDRPTMSSVVLMLSSETATIAEPKNPGFCLGSNPIETDSSSSKKDESCTVNQVTVTMVDGR | 858 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g01778 | 858 | Pfam | D-mannose binding lectin | 79 | 188 | IPR001480 | - | |
Tsu02g01778 | 858 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 78 | 227 | IPR036426 | - | |
Tsu02g01778 | 858 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 19 | 857 | - | - | |
Tsu02g01778 | 858 | SUPERFAMILY | Protein kinase-like (PK-like) | 517 | 810 | IPR011009 | - | |
Tsu02g01778 | 858 | Pfam | Protein tyrosine and serine/threonine kinase | 542 | 808 | IPR001245 | GO:0004672|GO:0006468 | |
Tsu02g01778 | 858 | PIRSF | SRK | 3 | 858 | IPR024171 | GO:0004674 | |
Tsu02g01778 | 858 | Pfam | PAN-like domain | 352 | 417 | IPR003609 | - | |
Tsu02g01778 | 858 | Gene3D | Transferase(Phosphotransferase) domain 1 | 615 | 822 | - | - | |
Tsu02g01778 | 858 | CDD | STKc_IRAK | 545 | 810 | - | - | |
Tsu02g01778 | 858 | ProSiteProfiles | PAN/Apple domain profile. | 352 | 432 | IPR003609 | - | |
Tsu02g01778 | 858 | Pfam | S-locus glycoprotein domain | 221 | 331 | IPR000858 | GO:0048544 | |
Tsu02g01778 | 858 | PANTHER | - | 19 | 857 | - | - | |
Tsu02g01778 | 858 | CDD | B_lectin | 37 | 162 | IPR001480 | - | |
Tsu02g01778 | 858 | Gene3D | Phosphorylase Kinase; domain 1 | 512 | 614 | - | - | |
Tsu02g01778 | 858 | Pfam | Receptor serine/threonine kinase | 495 | 529 | IPR022126 | GO:0004674 | |
Tsu02g01778 | 858 | SMART | serkin_6 | 539 | 808 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g01778 | 858 | ProSiteProfiles | Protein kinase domain profile. | 539 | 825 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g01778 | 858 | CDD | PAN_AP_plant | 350 | 432 | - | - | |
Tsu02g01778 | 858 | Gene3D | - | 25 | 159 | IPR036426 | - | |
Tsu02g01778 | 858 | SMART | blect_4 | 37 | 162 | IPR001480 | - | |
Tsu02g01778 | 858 | ProSiteProfiles | Bulb-type lectin domain profile. | 31 | 155 | IPR001480 | - | |
Tsu02g01778 | 858 | ProSitePatterns | Protein kinases ATP-binding region signature. | 545 | 567 | IPR017441 | GO:0005524 | |
Tsu02g01778 | 858 | Pfam | Domain of unknown function (DUF3403) | 812 | 858 | IPR021820 | GO:0004674 | |
Tsu02g01778 | 858 | SMART | ntp_6 | 352 | 431 | IPR003609 | - | |
Tsu02g01778 | 858 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 660 | 672 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g01778 | Tsu-Chr2 | 15956656 | 15962170 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g01778 | 527 | 853 | Receptor kinase-like Gene Family | AT4G11530 | 59.036 | 7.67e-135 | 416 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Tsu02g01778 | PK_Tyr_Ser-Thr | 7.9e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g01778 | - | - | cam:101504189 | 1429.08 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu08g04193 | 08 | 60139874 | 60143346 | Tsu02g01778 | 02 | 15956656 | 15962170 | PCT |