Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01777 ATGGATTCTGCTAAAAATCTTCTCTGCCTTGTCACAACCCAAAATCCTAAAAACAAGTTGTTAGTGTTACATAACTCTTTGTTTCTAATACTTATGATCACCTTCAATTTTTGCTCTTGTTCTTCTGATACCATATCTATTAACAAACCAATAAGAGATGGTGAGCTTCTGATTTCTAAATCTAAAACGTTTGCTCTTGGATTCTTCACTCCAGGAAAGTCCACCTCTCGCTATGTTGGAATTTGGTACAACAATTTGCCAATCCAAACTATTGTTTGGGTTGCAAACAGAGATAGTCCAATCAAGGACACTTCTGGAATTCTATCAATCAGTCCAAATGGAAATCTAGTACTCCACCGCGATCTTAGTAGCACCATTTCAATTTGGTCTACCAATGTTTCATTACCACAATCACAAAGAAATAACACCAGTGCTGTTATAGCTCAACTATCGGATATAGCAAATCTTGTTCTGATGATAAACAACACCAGAACTGTATTATGGGAAAGCTTTGAGCATCCCACAGATACCTTGCTTCCATATCAAAGGCTTGGTTTTGATAGAAAAACTAATCAAAGTTGGTTCCTTCAATCCTGGAAGACAGATGATGACCCTGGAAATGGTTCTTTCACAGCGAAATTCAGCACCATTGGCAAACCTCAGTTGTTTATGTACAATCGTGATCTTCCTTGGTGGCGTGCTGGACATTGGAACGGTGCATTATTAGCAGGTCTACCTAATATGAAACGAGATATGGCCATTTCTAACGTTTCTTTGGTTGAAGATGACAATCATGTAGCACTCTCATATAACATGTTTGATAAGTCTGTCATTACTAGGATAGTGGTTCAGCAATCTGGTTTCACACAAACATTCTCGTGGGACAGTCAAAAGAGTCAATGGATCTTGCACTGGTCTGAACCAACAGACCAATGTGATAGCTATGGAACATGTGGATCAAACAGTAATTGTGACTCTTCGAACTTTCAGGACTTTAAGTGCACTTGTTTACCTGGTTTTGAACCTAAATTTCCACGTGATTGGTATGAGAGTAGAGATGGGTCAGGAGGGTGTGTAAGGAAGAAAGGTGAATCTGTTTGTGGGAATGGAGAAGGGTTTGTCAGAGTTGAAAGCTTGAAAGTTCCTGACACATCTATGGCAGTTGCTAAAGGTGGTTTGAGTTTGGAAGAATGCAAGACAGAATGCTTAAATAACTGCTCTTGTACTGCTTATGCAGTTGCTGATGTGAGGAATGGTGGAAGTGGCTGTTTGGCATGGTATGGGGATCTAATTGACATTCAAAAACTTAGTGATCAAGGCCAAGATTTATTTTTACGCGTCGATAAAGTTGAACTTGCCAATTactacaaaaaaagaaaacgagtCCTTCATAACAAGAGGTTGTCTGCAATTCTTGTAGCTTCTATAGTTGCAATTATCATCCTCCTAACCTGTGTGAATTACCTGTGgaggaaaaaaagaaaggATGAAATGATGCGGCAACTAAACCAAGATTCCTCTGGAGAAGAGAATGGTGCTCAAAGAAACACACATCCAAATTTACCATTTTTCAACTTTAAAACGATAATGACAGCTACAAGAAACTGTGGTCATGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCTTGGTTAATGGACAAGAGATAGCAGTGAAAAGATTATCAAAACATTCAGGTCAAGGCAAAGAAGAGTTTAAAAATGAAGTTACACTTTTAGTTAAACTCCAACACAGAAATCTGGTGAGATTGCTTGGTTGTTgctttgaaaaagaagaaaggatCCTAGTTTACGAATACCTACCAAACAAAAGCCTAGACTTCTTTATATTCGATCAAAACCAAAGGTCATCACTGGATTGGGGTAAGCGCTTTGAAATTATTTGTGGGATTGCTCGAGGTGTTTTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCCAGCAACGTTCTTCTTGATGCTGCAATGAATCCCAAAATATCAGATTTCGGTATGGCTAGAATATTTGGAGAAGATGAAATACAAGCAAGAACACAGAGATTGGTTGGAACATATGGATATATGGCACCAGAATATGCAATGGAAGGATGTTATTCAACTAAATCTGATGTCTTCAGTTATGGTGTCTTACTACTGGAGATTATTGCTGGCCAAAGAAACACGCATTGTGAAACAGGAAGAGTCTCTCCAAATTTAATTGGACATGTGTGGACACTATGGACAGAAGGAAGAGCCTCGGATATAGTTGATCCAGCCCTAAACCAGTCTTATCCTTCGGCTATGGTTCTGAGATGCATTCAAATTGGAATTTTGTGTGTGCAAGAAAATGCCATGAATAGACCATCAATGTTAGAAGTTGTTTTCATGCTATGCAATGAAACACCTCTTTACCAGCCTCAAAAACCAGCATTCTTATTCAATGGCAAACAAGATTTGCAAGAGTTATCAACATCAGGAGGAGGATCTTCAATAAATGAAATAACAGAAACTACCATCAGTGCTCGCTAA 2559 0.3771 MDSAKNLLCLVTTQNPKNKLLVLHNSLFLILMITFNFCSCSSDTISINKPIRDGELLISKSKTFALGFFTPGKSTSRYVGIWYNNLPIQTIVWVANRDSPIKDTSGILSISPNGNLVLHRDLSSTISIWSTNVSLPQSQRNNTSAVIAQLSDIANLVLMINNTRTVLWESFEHPTDTLLPYQRLGFDRKTNQSWFLQSWKTDDDPGNGSFTAKFSTIGKPQLFMYNRDLPWWRAGHWNGALLAGLPNMKRDMAISNVSLVEDDNHVALSYNMFDKSVITRIVVQQSGFTQTFSWDSQKSQWILHWSEPTDQCDSYGTCGSNSNCDSSNFQDFKCTCLPGFEPKFPRDWYESRDGSGGCVRKKGESVCGNGEGFVRVESLKVPDTSMAVAKGGLSLEECKTECLNNCSCTAYAVADVRNGGSGCLAWYGDLIDIQKLSDQGQDLFLRVDKVELANYYKKRKRVLHNKRLSAILVASIVAIIILLTCVNYLWRKKRKDEMMRQLNQDSSGEENGAQRNTHPNLPFFNFKTIMTATRNCGHENKLGQGGFGSVYKGCLVNGQEIAVKRLSKHSGQGKEEFKNEVTLLVKLQHRNLVRLLGCCFEKEERILVYEYLPNKSLDFFIFDQNQRSSLDWGKRFEIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDEIQARTQRLVGTYGYMAPEYAMEGCYSTKSDVFSYGVLLLEIIAGQRNTHCETGRVSPNLIGHVWTLWTEGRASDIVDPALNQSYPSAMVLRCIQIGILCVQENAMNRPSMLEVVFMLCNETPLYQPQKPAFLFNGKQDLQELSTSGGGSSINEITETTISAR 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01777 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Tsu02g01777 852 Pfam Protein tyrosine and serine/threonine kinase 539 804 IPR001245 GO:0004672|GO:0006468
Tsu02g01777 852 CDD PAN_AP_plant 368 447 - -
Tsu02g01777 852 Gene3D Phosphorylase Kinase; domain 1 510 611 - -
Tsu02g01777 852 Pfam D-mannose binding lectin 90 200 IPR001480 -
Tsu02g01777 852 ProSiteProfiles EGF-like domain profile. 308 346 IPR000742 -
Tsu02g01777 852 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 205 IPR036426 -
Tsu02g01777 852 SMART ntp_6 368 447 IPR003609 -
Tsu02g01777 852 Gene3D Transferase(Phosphotransferase) domain 1 612 817 - -
Tsu02g01777 852 CDD STKc_IRAK 542 809 - -
Tsu02g01777 852 Pfam PAN-like domain 367 433 IPR003609 -
Tsu02g01777 852 Gene3D Hepatocyte Growth Factor 365 445 - -
Tsu02g01777 852 SMART serkin_6 539 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01777 852 ProSiteProfiles PAN/Apple domain profile. 367 448 IPR003609 -
Tsu02g01777 852 ProSiteProfiles Bulb-type lectin domain profile. 42 171 IPR001480 -
Tsu02g01777 852 Pfam S-locus glycoprotein domain 232 344 IPR000858 GO:0048544
Tsu02g01777 852 ProSiteProfiles Protein kinase domain profile. 536 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01777 852 SMART blect_4 48 174 IPR001480 -
Tsu02g01777 852 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 27 849 - -
Tsu02g01777 852 CDD B_lectin 48 174 IPR001480 -
Tsu02g01777 852 MobiDBLite consensus disorder prediction 504 521 - -
Tsu02g01777 852 SUPERFAMILY Protein kinase-like (PK-like) 518 816 IPR011009 -
Tsu02g01777 852 Gene3D - 36 172 IPR036426 -
Tsu02g01777 852 PANTHER - 27 849 - -
Tsu02g01777 852 MobiDBLite consensus disorder prediction 501 521 - -
Tsu02g01777 852 ProSitePatterns Protein kinases ATP-binding region signature. 542 564 IPR017441 GO:0005524
Tsu02g01777 852 MobiDBLite consensus disorder prediction 831 852 - -
Tsu02g01777 852 PIRSF SRK 15 852 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01777 Tsu-Chr2 15896976 15938929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01777 524 850 Receptor kinase-like Gene Family AT4G11530 55.422 9.66e-121 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu02g01777 PK_Tyr_Ser-Thr 5.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01777 - - mtr:MTR_4g091840 1425.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01777 02 15896976 15938929 Tsu08g04197 08 60173691 60177643 PCT