Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01776 ATGAACTCAATGGACTCAGCTAAGAATCTTATCTACCTTGTCACAGCCAAGAATGATAAACACAAATGGCTGCTAATTAATTCTTTGATTATACTTCTCACTTTCTCTTTTTGCTCTTGTTCTTCTGATACCATATCTTCTGACAAACCCGTAAGAGATGGCGAGCTTCTGATTTCTAAATCTAAAACCTTTGCTCTTGGATTCTTCTCTCCAGGTAAATCCAACTCTCGCTATGTTGGAATTTGGTACAACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAACAGAGATAGTCCAATCAATGACACTTCTGGAATCCTATCAATCAACCGAAATGGAAATCTAGTACTCCACCACAACCTAAGCACCATTCCCATTTGGTCAACCAACCTTTCATTCCCACAATCACAAAGAATTAGTACCAGTGGTGTCATAGCTCAATTATCGGATCCAGGAAACCTTGTTCTGATGCTAAATAACACCAAAACTGTTACGTGGCAAAGCTTTGATTATCCCACAGACACTTTGCTTCCATATCAAAGGCTTGGTTTTGATAGAAAAACTAATCAAAGTTGGTTTCTTCAATCTTGGAAAACAGATGATGACCCTGGAAAAGGCGCCTTCACGTTGAAATTCAGCACCATTGGTAAAACTCAATTATTTGTGTACAAGCATAACCTTCCTTGGTGGCGTGGTGGACCTTGGATTGGAACAATATTAGCAGGTGTACCTAATGTGAAACGAAATCGGGCCATTTTTAACGTTTCTTATTTTGAAGATGAGAATAATGTAGCACTCGCATATAACATGTTAGATAAGTCTATTACTAGGTTAGTGGTTCAGCAATCTGGTTTCTTTCAAACACTAATGTGGGACAATCAAAAGAATCAATGGAACCGGTTCTATTCAGAACCTGCCAACCAATGTGATGACTATGGTACATGTGGATCAAACAGTAATTGTGACCCTTTCAACTTTGACGACTTCAAGTGCACTTGTTTACCTGGTTTTGAACCCAAATTTCCACGTGATTGGTACGATAATGGAGATGGATCGGGAGGGTGTGTAAGGAAGAAAGGTGCATCTGTTTGCGGGAACGGAGAAGGGTTTGTCAAAGTTGTTAGCTTGAAAGTTCCTGATACATCTGTAGTTGCCAAAGGTGGTTTGAGTTTAGAAGAATGTGAGAAAGAATGCTTGAGAAACTGCTCTTGTACTGCCTATGCAGTTGCTGATGTGAGTAATGGTGGAAGTGGCTGTTTGGCATGGCATGGGGATTTAATGGACATTCAGAAACTAACTGATCAAGGACAAGATTTATTTTTACGCGTTGATAAAGTTGAATTAGCCAATTACGACAGAAAAAGCAAAGGAGTCCTTGATAAAAAGAGGTTTGCTGCAATTCTGGTAGCTTCTATAGTTGCAATTGTCCTCCTCGTCTTCTCCCATGTGCACTGCAggttgaagaaaaaaagaaagcGTAAAATGATGCGGCAATTACACCAAGATTCCTCTGGAGAAGTGAATGGTGCTCATAGCAACACACATCCAAATCTACCCTTTTTCAGCTTTAAAACAATAATGACAGCTACAAGAAATTGTGATCATGAGCATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGATGCTTGGTTAATGGACAAGAGATAGCAGTGAAAAGATTGTCCAAAGATTCAGGTCAAGGAAAAGAAGAGTTTAAAAATGAAGTTACACTTTTAGTTAAACTTCAACACAGAAATCTAGTGAGGTTGCTCGGTTGTTGCTTTGAGAAAGAAGAAAGGATGCTAGTTTATGAATACCTGCCAAACAAAAGTCTAGACTTCTTTATATTCGATCAAAACCAAAGGTCATCACTGGATTGGGGTAAGCGCTTTGAAATTATTTGTGGGATTGCTCGAGGTGTTTTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCTAGCAATGTTCTCCTTGATGCTGCAATGAATCCCAAAATATCAGATTTTGGTATGGCTAGAATATTTGGCGAAGATGAAATCCAAGCAAGAACAAAAAGAGTGGTTGGAACATATGGATATATGTCACCGGAATATGCAATGGAAGGCCGATACTCAACAAAATCTGATGTCTTTAGTTACGGGGTCTTACTACTGGAAATTGTTGCAGGCAAACGAAACACACATTGTGAAATAGGAAGAGAGTCCCCAAATTTAATTGGACATGTGTGGACACTATGGACAGAAGGAAGAGCCTTGGATATAGTTGATCCATCCATAAACCAGTCTTATCCTTCGGATATAGTTCTGAGATGCATTCAAATTGGACTCTTGTGTGTGCAAGAAAAGGCCATGAATAGACCATCCATGTTAGAAGTTGTTTTCATGCTAGCCAATGAAACACCTCTTTCCCCAGCTAAAAAACCAGCTTTTATATTTAATGGCAGCCGAGATTTGCAAGAATCATCAACATCGGGAGCAGTATATTCAATAAATGATTTAACAGAAACTACCGTCAGTGCTCGCTAA 2553 0.3878 MNSMDSAKNLIYLVTAKNDKHKWLLINSLIILLTFSFCSCSSDTISSDKPVRDGELLISKSKTFALGFFSPGKSNSRYVGIWYNNLPIQTVVWVANRDSPINDTSGILSINRNGNLVLHHNLSTIPIWSTNLSFPQSQRISTSGVIAQLSDPGNLVLMLNNTKTVTWQSFDYPTDTLLPYQRLGFDRKTNQSWFLQSWKTDDDPGKGAFTLKFSTIGKTQLFVYKHNLPWWRGGPWIGTILAGVPNVKRNRAIFNVSYFEDENNVALAYNMLDKSITRLVVQQSGFFQTLMWDNQKNQWNRFYSEPANQCDDYGTCGSNSNCDPFNFDDFKCTCLPGFEPKFPRDWYDNGDGSGGCVRKKGASVCGNGEGFVKVVSLKVPDTSVVAKGGLSLEECEKECLRNCSCTAYAVADVSNGGSGCLAWHGDLMDIQKLTDQGQDLFLRVDKVELANYDRKSKGVLDKKRFAAILVASIVAIVLLVFSHVHCRLKKKRKRKMMRQLHQDSSGEVNGAHSNTHPNLPFFSFKTIMTATRNCDHEHKLGQGGFGSVYKGCLVNGQEIAVKRLSKDSGQGKEEFKNEVTLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDQNQRSSLDWGKRFEIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDEIQARTKRVVGTYGYMSPEYAMEGRYSTKSDVFSYGVLLLEIVAGKRNTHCEIGRESPNLIGHVWTLWTEGRALDIVDPSINQSYPSDIVLRCIQIGLLCVQEKAMNRPSMLEVVFMLANETPLSPAKKPAFIFNGSRDLQESSTSGAVYSINDLTETTVSAR 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01776 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 204 IPR036426 -
Tsu02g01776 850 PIRSF SRK 17 850 IPR024171 GO:0004674
Tsu02g01776 850 CDD STKc_IRAK 540 805 - -
Tsu02g01776 850 ProSiteProfiles Bulb-type lectin domain profile. 42 170 IPR001480 -
Tsu02g01776 850 Gene3D - 35 170 IPR036426 -
Tsu02g01776 850 SMART serkin_6 534 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01776 850 Pfam S-locus glycoprotein domain 231 342 IPR000858 GO:0048544
Tsu02g01776 850 Gene3D Transferase(Phosphotransferase) domain 1 610 815 - -
Tsu02g01776 850 SUPERFAMILY Protein kinase-like (PK-like) 515 812 IPR011009 -
Tsu02g01776 850 Pfam D-mannose binding lectin 90 199 IPR001480 -
Tsu02g01776 850 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 26 847 - -
Tsu02g01776 850 SMART ntp_6 366 444 IPR003609 -
Tsu02g01776 850 Gene3D Phosphorylase Kinase; domain 1 508 609 - -
Tsu02g01776 850 CDD B_lectin 48 173 IPR001480 -
Tsu02g01776 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Tsu02g01776 850 Pfam PAN-like domain 365 430 IPR003609 -
Tsu02g01776 850 Pfam Protein tyrosine and serine/threonine kinase 537 802 IPR001245 GO:0004672|GO:0006468
Tsu02g01776 850 CDD PAN_AP_plant 366 444 - -
Tsu02g01776 850 SMART blect_4 48 173 IPR001480 -
Tsu02g01776 850 ProSitePatterns Protein kinases ATP-binding region signature. 540 562 IPR017441 GO:0005524
Tsu02g01776 850 ProSiteProfiles EGF-like domain profile. 306 344 IPR000742 -
Tsu02g01776 850 PANTHER - 26 847 - -
Tsu02g01776 850 ProSiteProfiles PAN/Apple domain profile. 365 445 IPR003609 -
Tsu02g01776 850 Gene3D Hepatocyte Growth Factor 363 442 - -
Tsu02g01776 850 ProSiteProfiles Protein kinase domain profile. 534 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01776 Tsu-Chr2 15879979 15894962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01776 492 850 Receptor kinase-like Gene Family AT4G11530 53.261 2.52e-124 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu02g01776 PK_Tyr_Ser-Thr 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01776 - - mtr:MTR_4g091840 1351.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01776 02 15879979 15894962 Tsu08g04198 08 60183099 60186580 PCT