Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01774 ATGAAAGTTCTTCTTCTGTTGTTGATCGTTTATTACCCTTGTTGCCACTCACTTGACACCATAACACTGAACAAATCATTGAAAGACGGCGATGTTTTAGTCTCCAACAATCGTGGAACCTTCGCACTTGGTTTCTTCAGCTTACAGAAAGATTCTAAAACCAGATACCTTGGTATATGGTACAATAAAGTTTCGGAACAAACCATTGTTTGGGTTGCTAATAGAGACACTCCTTTGAATGACACTTCTGGTGTTCTTTCGATCAACAATGGAAACCTCGTACTCAATAACAACAACACGAAAAACCTTAAACCTATTTGGTCTTCCAATGTTTCTGTTTCTACCTCAATTGGAAATGTTTCAGCTACACTTTTGGACATTGGAAACTTTGTTTTGACTCATAACAGTGGAAAAAATGTTTGGCAGAGTTTTGATTTTCCATCTAACACATTGCTTCCTTACATGAAACTCGGGTTGAATACTAAAACCGGTTTGAATTGGTTCATCACATCGTGGAAATCTCCGAATGACCCAGGAACCGGGAACTTGACATACCGGATTGACCCGACAGGGTATCCCCAACTGTTTCTCTATAAAAACAATGTCCCAATATGGAGAACCGGGTCGTGGACTGGTCAGAGATGGAGCGGTGCACCTGAAATGACTCtggattttattttcaattatagtTTTATCAGCAACAAAGATGAAGTTTCAATAGTGTATGGTGTGGTGGATCCAAATGTGTTATCGAGATTGGTTCTAGAAGACAACGGTCACACGAGAAGGATGACATGGCAACCAAAAGAACAAAGGTGGTTTCAAATTTGGTATGGTCCGAAAGAAGAATGTGATAATTTCAAACAATGCGGGCCAAACTCAATTTGTGACCCGTACAATACTGAAAAGTTTGAGTGTGAGTGTTTACCCGGATTTGAACCCAAGTATGCGAGCGAGTGGTATTTGAGAGACGGGTCGGGTGGGTGTGTGAGGAAGGGGAATGTGTCCACATGTCGAAGTGGGGAAGGGTTTGTGAAAATGGCACTTGTGATGGTGCCTGATACTTCGAAGACACGTGTGAATGAGAGTATGAGTTTGAGAGAGTGTAAGGAGGAATGTTTGGGGGATTGTTCTTGTGTTGCATTTACAAGTGAAAATGAGGTGTTGCAAAGTGGGTGTGTTACTTGGCATGGTGATATGAATGATACAAGAACTTACACACAAGTCGGACAAGATTTGTATGTACGCGTTGATAAGCATGAATTAGGTAGGTACTCCTTCTTTTTACTTGGAAAAATAAGTCAAATTCTTATCAATGTTGACATTGTAGGATTCTTGATTCTATTTTCGTGCTCAAATATGAGTGTTATTTTGTTTCCTTGTTTGATGATAGGGTTGAGAAGGGATCACAACGATTCATTTCGTCTTAGCTTTGACGACTCTTCTAATCTGCAAGAATTTAATAGgacaaacaaatcaaatttaCCATTCTTTGATCTTAGCTCCATAGCTGCTGCAACAGACAATTTTTCCATTGCTAACAAACTTGGTGAAGGTGGTTTTGGTTCTGTTTATAAGGGTATATTGAGCAACGGTATGGAAATTGCAGTAAAGAGGCTGTCAAAATATTCTGGACAAGGCATAGAAGAGTTTAAAAATGAGGTCGTTTTGATTTCAAAACTCCAACACAGAAATCTTGTTAGGATCTTAGGTTGTTGCGTTCAAGGAGACGAGAAGATGTTAATCTATGAGTATTTGCCTAACAAAAGCTTaaactttttcatttttgATAAATCTAAAAGTTCAGAACTAGACTGGAGAAAGCGGTTTGATATTATCTGTGGCGTTGCTAGAGGGATCTTATATCTTCACCACGACTCGCGATTAAGAATCATCCATAGAGACCTAAAGGCTAGCAATGTCTTGTTGGACATGGAATTGAACCCAAAAATTTCAGATTTTGGTATGGCTAGAATGTTTGGTGGAGATCAAATTGTAGCAACTACAAAACGTGTCGTTGGAACCTACGGTTATATGTCTCCAGAGTATGCGATGGAAGGACAATTTTCGGTGAAGTCTGATGTATACAGCTTTGGAGTTTTGCTGCTAGAGATTATTACAGGCAAAAGGAACAGCGTTCAATATGAAGACTATGAATCCACAACTTTAGTTGGACATATATGGAATCTATGGAGAGAAGACAAAGCCATGGAGATTATTGATGAATCATTAGGAGAGTCATTCTCTGAGCTTGAAGTTGAAAGATGCATCCAAATTGGACTTTTATGTGTACAAGATTTTGCTATTGACAGACCATCTATGTCAGCTGTTGTTTCTATGTTGGGAAATGACTCAACTCTTCCTACTCCAAAACAACCTGCATTTATTTTCAAGAGAAGTAATTATGAGAATTCAAATCCATCAACCAGTGAAGGAATTCACTCACTAAATGATGTAAGTATGACTATGATTGAAGCTCGCTAA 2484 0.3829 MKVLLLLLIVYYPCCHSLDTITLNKSLKDGDVLVSNNRGTFALGFFSLQKDSKTRYLGIWYNKVSEQTIVWVANRDTPLNDTSGVLSINNGNLVLNNNNTKNLKPIWSSNVSVSTSIGNVSATLLDIGNFVLTHNSGKNVWQSFDFPSNTLLPYMKLGLNTKTGLNWFITSWKSPNDPGTGNLTYRIDPTGYPQLFLYKNNVPIWRTGSWTGQRWSGAPEMTLDFIFNYSFISNKDEVSIVYGVVDPNVLSRLVLEDNGHTRRMTWQPKEQRWFQIWYGPKEECDNFKQCGPNSICDPYNTEKFECECLPGFEPKYASEWYLRDGSGGCVRKGNVSTCRSGEGFVKMALVMVPDTSKTRVNESMSLRECKEECLGDCSCVAFTSENEVLQSGCVTWHGDMNDTRTYTQVGQDLYVRVDKHELGRYSFFLLGKISQILINVDIVGFLILFSCSNMSVILFPCLMIGLRRDHNDSFRLSFDDSSNLQEFNRTNKSNLPFFDLSSIAAATDNFSIANKLGEGGFGSVYKGILSNGMEIAVKRLSKYSGQGIEEFKNEVVLISKLQHRNLVRILGCCVQGDEKMLIYEYLPNKSLNFFIFDKSKSSELDWRKRFDIICGVARGILYLHHDSRLRIIHRDLKASNVLLDMELNPKISDFGMARMFGGDQIVATTKRVVGTYGYMSPEYAMEGQFSVKSDVYSFGVLLLEIITGKRNSVQYEDYESTTLVGHIWNLWREDKAMEIIDESLGESFSELEVERCIQIGLLCVQDFAIDRPSMSAVVSMLGNDSTLPTPKQPAFIFKRSNYENSNPSTSEGIHSLNDVSMTMIEAR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01774 827 Pfam Domain of unknown function (DUF3403) 783 827 IPR021820 GO:0004674
Tsu02g01774 827 Pfam S-locus glycoprotein domain 205 315 IPR000858 GO:0048544
Tsu02g01774 827 Gene3D Phosphorylase Kinase; domain 1 473 585 - -
Tsu02g01774 827 Pfam PAN-like domain 338 403 IPR003609 -
Tsu02g01774 827 CDD B_lectin 24 147 IPR001480 -
Tsu02g01774 827 SUPERFAMILY Protein kinase-like (PK-like) 495 798 IPR011009 -
Tsu02g01774 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 178 IPR036426 -
Tsu02g01774 827 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 40 823 - -
Tsu02g01774 827 SMART serkin_6 510 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01774 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Tsu02g01774 827 ProSiteProfiles Protein kinase domain profile. 510 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01774 827 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Tsu02g01774 827 SMART ntp_6 339 417 IPR003609 -
Tsu02g01774 827 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 40 823 - -
Tsu02g01774 827 Gene3D Transferase(Phosphotransferase) domain 1 586 791 - -
Tsu02g01774 827 PIRSF SRK 1 827 IPR024171 GO:0004674
Tsu02g01774 827 CDD PAN_AP_plant 336 417 - -
Tsu02g01774 827 Pfam D-mannose binding lectin 68 173 IPR001480 -
Tsu02g01774 827 Pfam Protein tyrosine and serine/threonine kinase 512 777 IPR001245 GO:0004672|GO:0006468
Tsu02g01774 827 SMART blect_4 24 147 IPR001480 -
Tsu02g01774 827 CDD STKc_IRAK 516 781 - -
Tsu02g01774 827 ProSiteProfiles Bulb-type lectin domain profile. 18 145 IPR001480 -
Tsu02g01774 827 ProSiteProfiles EGF-like domain profile. 280 318 IPR000742 -
Tsu02g01774 827 Gene3D - 15 144 IPR036426 -
Tsu02g01774 827 ProSiteProfiles PAN/Apple domain profile. 338 418 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01774 Tsu-Chr2 15856650 15860437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01774 498 827 Receptor kinase-like Gene Family AT4G11530 57.864 1.55e-129 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu02g01774 PK_Tyr_Ser-Thr 6.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01774 - - gmx:100812814 1205.66