Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01773 ATGAAACTGTTTCTTCTGCTCTTCATCCTTTACTACCCTTGTTGCTATTCACTTGATACTATAACATTAAACCAAACAATCAAAGACGCTGATGTTTTAATCTCCAACGTTCGAGGAACCTTTGCACTTGGTTTCTTTAGCTTACAGAATAATTCCAAAACTCGTTATCTTGGTATATGGTATAACAAAATTTCAGAACAAACCGTTGTTTGGGTTGCTAATAGAGACACTCCTTTGTATAATACTTCTGGTGTTCTCTCTATCAAGAACGGAAACCTCGTACTCCATAACAACAATGACCAAAACCTTAAACCTATTTGGTCTTCCAATGTTTCTGTTTCTAGCTCAATTGGAAATGTTTCAGCTAAGCTTTTGGATAATGGAAACTTTGTTTTGACTCATAACAATGGAAAAAAAGTTGTATGGCAGAGTTTTGATTTTCCATCTAATACTTTACTTCCTTTCATGAAACTCGGGTTGAACCGTAGAACCGGTTTGAACCGGTTCCTCACATCTTGGAAATCCCCGAATGACCCGGGGACCGGAAACTTGACATACCGGATTGACCCGACCGGGTATCCACAACTGTTTCTCTATAGAAATAATAAAGATCCAGCTTGGAGAACCGGGTCGTGGACGGGTCAACGATGGAGCGGAGTACCTGAGATGACTCCGACTTTCATCTTCAACGTTAGTTTTATTAACGATGAAGATGAAGTTTTTATAATGTATGGTGTGAAGGATCCAATGGTGTTATCGAGAATGGTGTTGGATGAAACCGGTCACGTGAGGAGGCTGACGTGGCAACCAAACGAACATAGATGGTTTCAAATTTGGTTTGGTCCGAAAGAAGAATGTGATAATTTCAAACAATGCGGGTCGAATTCAAATTGTGACCCATATAATGCTGAAAAGTTTGAGTGTGAGTGTTTACCTGGATTTGAACCGAAATTTCCGAGAGAGTGGTATTTGAGAGATGGGTCGGGTGGGTGTGTTAGGAAGGGGAATGTGTCCACATGTCGAAGTGGGGAAGGGTTTGTGAAAGTGGCACGTGTGAAGGTGCCCGATACTTCGAAGACACGTGTGAATGAGAGTTTGAGTTTGAAGGAGTGTAAGGAGGAATGTTTGGGGGATTGTTCTTGTGTTGCATTTACAAGTGAAAATGAGATGTTGCAAGGTGGGTGTGTTACTTGGCATGGTGATATGGAGGATACAAGAACTTATACACAAGTTGGACAAGATTTGTATGTACGTGTTGATAAGCATGAATTGGCTAGATATGCAAAACATCCATATGGTTCTCTTGGCAAAAAGGGAATGATTGCACTTTTAGTCGTTTGTacttgtttgatattttttatggggACCATTTTCGCGTATTGGTTTGTAAAAGCGAGAAAACAAGGGGCGAGAAGGGATCGCAAGTTTTCCTTTCGTCTTAGCTTTCCTGACTCGGATAAGCAAGAATTTGAAAGTACAAACAATTCAAATTTACCATTCTTTGATCTTAGCATCATTGCTGCTGCAACAAACAATTTTTCAATTGCTAACAAGCTTGGTGAAGGTGGTTTTGGTTCTGTTTATAAGGGTATATTGAGCAACGGAGTGGAAATTGCAGTGAAGAGGCTGTCAAAATATTCTGGACAAGGCATAGAAGAGTTTAAAAATGAGGTTGTTTTGATTTCAAAACTCCAACATAGAAATCTTGTTAGGATCTTAGGTTGTTGCGTTCAAGGAGACGAGAAGATGTTAATCTACGAGTATTTGCCGAATAAAAGCTTAGactttttcatttttgATAAATCTAAAAGTTCAGAGCTAAATTGGAGAAAGCGGTTTGATATCATTTGTGGCGTTGCTAGAGGGATCCTATATCTTCACCATGACTCGCGATTAAGAATCATTCATAGAGACCTAAAAGCCAGCAATGTTTTGTTGGACACTGCATTGAAACCAAAAATTGCAGATTTTGGTATGGCTAGAATGTTTGGTGGAGATCAAATGGAAGCAACTACAAAACGTGTCGTTGGAACCTACGGTTATATGTCTCCAGAGTACGCTATGGAAGGACAATTTTCGGTGAAGTCTGATGTATACAGCTTTGGAGTTTTGCTGCTAGAGATAGTTACAGGCAAAAAGAACAGTGGTCAATATGAAGACAATGAATCCACAAATTTAGTTGGACATATATGGAATCTATGGAGAGAAGACAAAGCCATGGATATTATTGATGAATCATTAGGAGAATCATTCTCTGAGCTTGAAGTCCAAAGATGCCTCCAAATTGGGCTTTTATGTGTACAAGATTTTGCTGTTGATAGACCATCTATGTCAGCTGTTGTTTCTATGTTAGGAAATGACTCAACTCTTCCTATTCCAAAACAACCAGCAtttattttcaagaaaagtaaTTATGAGGGTTCAAATCCATCAACAAGTGAAGGAATTTACTCAGTAAATGATGTAAGTATGACTATGATTGATGCTCGTTAA 2493 0.3835 MKLFLLLFILYYPCCYSLDTITLNQTIKDADVLISNVRGTFALGFFSLQNNSKTRYLGIWYNKISEQTVVWVANRDTPLYNTSGVLSIKNGNLVLHNNNDQNLKPIWSSNVSVSSSIGNVSAKLLDNGNFVLTHNNGKKVVWQSFDFPSNTLLPFMKLGLNRRTGLNRFLTSWKSPNDPGTGNLTYRIDPTGYPQLFLYRNNKDPAWRTGSWTGQRWSGVPEMTPTFIFNVSFINDEDEVFIMYGVKDPMVLSRMVLDETGHVRRLTWQPNEHRWFQIWFGPKEECDNFKQCGSNSNCDPYNAEKFECECLPGFEPKFPREWYLRDGSGGCVRKGNVSTCRSGEGFVKVARVKVPDTSKTRVNESLSLKECKEECLGDCSCVAFTSENEMLQGGCVTWHGDMEDTRTYTQVGQDLYVRVDKHELARYAKHPYGSLGKKGMIALLVVCTCLIFFMGTIFAYWFVKARKQGARRDRKFSFRLSFPDSDKQEFESTNNSNLPFFDLSIIAAATNNFSIANKLGEGGFGSVYKGILSNGVEIAVKRLSKYSGQGIEEFKNEVVLISKLQHRNLVRILGCCVQGDEKMLIYEYLPNKSLDFFIFDKSKSSELNWRKRFDIICGVARGILYLHHDSRLRIIHRDLKASNVLLDTALKPKIADFGMARMFGGDQMEATTKRVVGTYGYMSPEYAMEGQFSVKSDVYSFGVLLLEIVTGKKNSGQYEDNESTNLVGHIWNLWREDKAMDIIDESLGESFSELEVQRCLQIGLLCVQDFAVDRPSMSAVVSMLGNDSTLPIPKQPAFIFKKSNYEGSNPSTSEGIYSVNDVSMTMIDAR 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01773 830 ProSiteProfiles PAN/Apple domain profile. 340 420 IPR003609 -
Tsu02g01773 830 Pfam D-mannose binding lectin 68 174 IPR001480 -
Tsu02g01773 830 ProSiteProfiles Bulb-type lectin domain profile. 18 145 IPR001480 -
Tsu02g01773 830 PIRSF SRK 1 830 IPR024171 GO:0004674
Tsu02g01773 830 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Tsu02g01773 830 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 50 826 - -
Tsu02g01773 830 Pfam PAN-like domain 340 404 IPR003609 -
Tsu02g01773 830 SMART blect_4 24 148 IPR001480 -
Tsu02g01773 830 Gene3D Phosphorylase Kinase; domain 1 478 588 - -
Tsu02g01773 830 SMART serkin_6 513 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01773 830 SUPERFAMILY Protein kinase-like (PK-like) 496 797 IPR011009 -
Tsu02g01773 830 SMART ntp_6 341 419 IPR003609 -
Tsu02g01773 830 Pfam Domain of unknown function (DUF3403) 786 830 IPR021820 GO:0004674
Tsu02g01773 830 ProSiteProfiles EGF-like domain profile. 282 320 IPR000742 -
Tsu02g01773 830 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 50 826 - -
Tsu02g01773 830 Gene3D Transferase(Phosphotransferase) domain 1 589 791 - -
Tsu02g01773 830 CDD STKc_IRAK 519 784 - -
Tsu02g01773 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 179 IPR036426 -
Tsu02g01773 830 Gene3D - 16 145 IPR036426 -
Tsu02g01773 830 Pfam S-locus glycoprotein domain 207 318 IPR000858 GO:0048544
Tsu02g01773 830 CDD PAN_AP_plant 338 419 - -
Tsu02g01773 830 CDD B_lectin 39 148 IPR001480 -
Tsu02g01773 830 Pfam Protein tyrosine and serine/threonine kinase 515 747 IPR001245 GO:0004672|GO:0006468
Tsu02g01773 830 ProSiteProfiles Protein kinase domain profile. 513 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01773 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01773 Tsu-Chr2 15852161 15855923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01773 481 825 Receptor kinase-like Gene Family AT4G11530 55.114 8.70e-130 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu02g01773 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01773 - - gmx:100812814 1314.67