Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01757 ATGAGTAGCACTCTCTTGATTTTGGCCATAGGAATATGCACAGGCTTTGTGATTGGAGCCGGTTTGGCATTTTCAGTTTTAGTCTGTTTCTTCATGTTTGGTAAGAGGCGTGTAGAGGTAGAAGAGGTGGAGAAGAGCGGTCCTATGAGAACTGAGGTCGTTACTCTTCATGTCAAAGGGGCTGATTCCAGCTTAGCATTATCAGACTCCAATATGGCTTTTGAGTCACCAAGAACATCGGAATGGAGTAACACATCTTTATGGTTAGAAGGACTTAGGAAGAAGAATGCAGCATGTGGAATTCCCAAGTATTCTTACAAAGATATAGAAAAGGCTACTTCTAATTTCACAACGATCATAGGCCATGGAGCATTTGGTCCTGTTTACAAAGCAGTCATGTCTACAGGTGAGACGGTTGCAGTTAAAGTTCTTGGTGCTAATTCAAGACAAGGAGAACAAGAATTTTTAACTGAGGTCTTATTACTTGGAAGGTTACACCACAAAAATCTTGTCGGTTTGGTGGGATATGCTGCAGAAAGAGGACGGCATATGCTCCTTTACAATTACATGAGCAATGGCAGTCTTGCTTCGCATTTGTATGGTGATAATCATGAGCCGTTGAGCTGGGATTTGAGACTTAGCATAGCACTAGATGTTGCAAGGGTGCTGGAATATCTACATTACGGGGCTGATCCTCCTATTGTGCACCGAGACATCAAGTCTTCGAACATTCTATTGGATCAGTTTATGAAAGCCAAGGTCACTGACTTTGGGCTTTCGAGACCAGAGATGACTAAACCTCGTTTGTCAAACGTCAGAGGAACTTTTGGATATCTTGATCCCGAGTATATGTGTACAAGAACCTTCACTAAGAAAAGTGATGTTTATAGTTTTGGTGTGCTACTTTTCGAGCTTATTACCGGCAGGAATCCACAGCAGGGCCTCATGGAATATGTAAAACTTGCTGCCATGGAAAGCGAGGGCAAGATTGGATGGGAAGAAATTGTGGATCCGATACTGAATGGAAACTATGATGTACATAAGCTTACTGATGTGGCTTCACTTGCATTCAAATGTGTCAATGAAATCTCCAAAATCCGACCTTCAATGAGGGACATCGTTCAAGCATTATCTCAACTTTATAAGAAGCCTAATGTAAACTCTATCCGAGCATCTCCTTCTACGTTAAGAAAATCTCCTTCTACGTTAAGCAAATCTCCTTCTGCATTATACGAAGTGTCCCTTGAAGTGAAACAGTCAGAGGATCTGCGCAGATTGCACAGCCGATAA 1290 0.4202 MSSTLLILAIGICTGFVIGAGLAFSVLVCFFMFGKRRVEVEEVEKSGPMRTEVVTLHVKGADSSLALSDSNMAFESPRTSEWSNTSLWLEGLRKKNAACGIPKYSYKDIEKATSNFTTIIGHGAFGPVYKAVMSTGETVAVKVLGANSRQGEQEFLTEVLLLGRLHHKNLVGLVGYAAERGRHMLLYNYMSNGSLASHLYGDNHEPLSWDLRLSIALDVARVLEYLHYGADPPIVHRDIKSSNILLDQFMKAKVTDFGLSRPEMTKPRLSNVRGTFGYLDPEYMCTRTFTKKSDVYSFGVLLFELITGRNPQQGLMEYVKLAAMESEGKIGWEEIVDPILNGNYDVHKLTDVASLAFKCVNEISKIRPSMRDIVQALSQLYKKPNVNSIRASPSTLRKSPSTLSKSPSALYEVSLEVKQSEDLRRLHSR 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01757 429 ProSiteProfiles Protein kinase domain profile. 114 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01757 429 SUPERFAMILY Protein kinase-like (PK-like) 99 404 IPR011009 -
Tsu02g01757 429 CDD STKc_IRAK 120 380 - -
Tsu02g01757 429 Gene3D Phosphorylase Kinase; domain 1 81 189 - -
Tsu02g01757 429 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 4 398 - -
Tsu02g01757 429 SMART serkin_6 114 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01757 429 Pfam Protein tyrosine and serine/threonine kinase 116 377 IPR001245 GO:0004672|GO:0006468
Tsu02g01757 429 Gene3D Transferase(Phosphotransferase) domain 1 190 396 - -
Tsu02g01757 429 PANTHER OS01G0253100 PROTEIN 4 398 IPR045271 GO:0004714|GO:0006468
Tsu02g01757 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01757 Tsu-Chr2 15647171 15649921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01757 100 377 Receptor kinase-like Gene Family AT3G19300 43.706 5.57e-75 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Tsu02g01757 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01757 - - lang:109332283 571.237