Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01735 ATGGCTTTCCACACAAAAAGGAATATTCTCTTGCATACCTTTTTTTGGTGCTCTTTGCTCAGTATCTTCTTGACAAGTCATGGTACTGAGACTGATATCTTGTGTTTAAAATCCATTAAGAATTCCCTGGAAGACCCAAATAATTACTTAACCTCAAGCTGGAACTTCAGCAACAATTTCGAAGGTTACATATGTAGATTTAATGGTGTTGAATGTTGGCATCCTGATGAGAATAGAGTACTAAATATCAAACTGTCTAATATGGGGTTGAAGGGCCAATTTCCACGTGGCTTTAGGAACTGCTCATCGATCACAGGATTAGACCTTTCATTCAACGAGTTTTCAGGACCCATCCCAACTGATATATCAAGTATACTTCCATTTCTTACCAGCATTGATCTCAGGAACAACAAGTTCACCGGTGAAATTCCGATAGCTTTAGCAAATTGCACTTACCTGAATGCTCTTAAACTTGACAACAATACGCTAACAGGCGAAATTCCAAAAGAACTTGGTCAGTTTCCCAGGATTAGAACAATTTCTTTTTCTAACAATCAATTGTATGGGCAAGTGCCAATGTTCGACGGCTTAGTAAAAGTTAACTATGCTAACAATAGAGGACTTTGTGGAGGGTCTTTGACACCTTGCTCCTCAACACATGACAATCAAAACGATTTCCATCAATCGCTCAAAGGTGGTCTTATTGTTGGTTATGTTTTTTCATTAGTATTTTCTGTTATACTCACTCATATGTTCTACTCCAAATGTGCACATTGGGTCCAtcaattgaagaagaaaaagaatcacCTAAATAAAGCAATAGAATTCAGCAAATATATTTGCTCCATCACCAGCAGGAGAACACAGGTGGTAGTTAATCAGATGCACAAATTGTTAAATTTGCATATGGTACACAAAGAAAGAAAGGAGATCTCTGTATTATTCGAAAGGCTGACATCGACAATATGGTTGGAAGAACTGCGTGAAGTGACCGACTGTTTTGCTATGGACAACGCCATTGGGGTGGGAAAGATGGGAATGATGTACCAGGGAAAACTACGGAACGGTCAGTTACTAGCTGTTAAGAGATTATTTGACTCAAAGATGTTTAAAAAGCAGTTCCTTTTAGAAACAATGATTCTAGGTAGgtacaaacacaaaaatatagtTCCCCTACTTGGGTTCTGcattgaagaaaatgaaaggCTTTTGGCATACACATACATGTCAAATGGAAGACTTTCTAAATGGTTGCATCCTTTGAAAAGTGAAGTTAAGAGATTGAAATGGCCTGAGAGGGCCAACATTGCACTTGGAATAGCAAGAGGATTATCATGGCTACATCACACATGTGATTTGGGCATAGTGCATTTTAACATATGTTCAGAATGCATATTGCTAGATGATAATTTTGAACCCAAAATATCCAATTTTGGGGAGGCCAAATTTATGAATCCCAACATTGAAGATGACCTCGGCATAACATTTAAAGTACACGACGGAAAGAAGGATGTTTATGACTTCGGAAGTGTGCTTTTTGAACTGATTACAGGGAAAACATATAATGAACTCACTCGTTCATCTACCACCACCGATTTCTATGATAACCCTTCGAATTTTTATAATGCCATTGATAAATCTCTAACTGGGGAAGGATTTGAAAAAGAAGTATGTGCTGTCCTAAAGATTGCTTGTGAGTGTGTTAAACCTACAAACCAAAGGCCAACGATGCTCGAAGTTCACAACAATTTGAGCAATGTAATGAAGGCACAATATGGCACTAGTGATGATTCTAACTCAACCGGCGGATTGGAAATTGCTTCTGATATTATTATAGAGGAAATTGtagaattataa 1857 0.3662 MAFHTKRNILLHTFFWCSLLSIFLTSHGTETDILCLKSIKNSLEDPNNYLTSSWNFSNNFEGYICRFNGVECWHPDENRVLNIKLSNMGLKGQFPRGFRNCSSITGLDLSFNEFSGPIPTDISSILPFLTSIDLRNNKFTGEIPIALANCTYLNALKLDNNTLTGEIPKELGQFPRIRTISFSNNQLYGQVPMFDGLVKVNYANNRGLCGGSLTPCSSTHDNQNDFHQSLKGGLIVGYVFSLVFSVILTHMFYSKCAHWVHQLKKKKNHLNKAIEFSKYICSITSRRTQVVVNQMHKLLNLHMVHKERKEISVLFERLTSTIWLEELREVTDCFAMDNAIGVGKMGMMYQGKLRNGQLLAVKRLFDSKMFKKQFLLETMILGRYKHKNIVPLLGFCIEENERLLAYTYMSNGRLSKWLHPLKSEVKRLKWPERANIALGIARGLSWLHHTCDLGIVHFNICSECILLDDNFEPKISNFGEAKFMNPNIEDDLGITFKVHDGKKDVYDFGSVLFELITGKTYNELTRSSTTTDFYDNPSNFYNAIDKSLTGEGFEKEVCAVLKIACECVKPTNQRPTMLEVHNNLSNVMKAQYGTSDDSNSTGGLEIASDIIIEEIVEL 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01735 618 ProSiteProfiles Protein kinase domain profile. 334 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01735 618 PANTHER RECEPTOR-LIKE PROTEIN 55 8 587 - -
Tsu02g01735 618 Gene3D Phosphorylase Kinase; domain 1 294 408 - -
Tsu02g01735 618 SUPERFAMILY Protein kinase-like (PK-like) 314 584 IPR011009 -
Tsu02g01735 618 Gene3D Transferase(Phosphotransferase) domain 1 409 605 - -
Tsu02g01735 618 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 8 587 - -
Tsu02g01735 618 SUPERFAMILY L domain-like 29 197 - -
Tsu02g01735 618 Gene3D Ribonuclease Inhibitor 29 218 IPR032675 -
Tsu02g01735 618 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Tsu02g01735 618 Pfam Protein kinase domain 337 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01735 Tsu-Chr2 15290507 15297128 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01735 30 591 Receptor kinase-like Gene Family AT3G28450 34.471 3.46e-102 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Tsu02g01735 Pkinase 7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01735 - - mtr:MTR_4g092520 726.472