Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01734 ATGATTATGGGTAGGTACATACACAACAATATAGTTCCCCTGCTCGGGTTCTTCATTGAAGGAAAGGAAAGGCTATTGGCATATCCATACATGTCAAATGGGAGGCTTTCCAAATGGTTGCATCCTTTGGAAAGTGAAGTCATAAGATTGAAATGGCATGACAGGATCAACATTGCACTCGGAATAGCAAAAGGATTATCATGGCTACATCATACATGTGATTTGGGCATAGTGCATTTTAACATATGTTCAGAATGCATATTGCTAGATGAGAATTTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGAATCCCAACATTGAAGATAATCTAGGCACGATGTTTAAAGTGAATGACGGGAAGAAGGATGTCTATGACTTTGGTAGTGTGCTTTTTGAATTGATGACAGGGAAAACGTATAATGAATTGTCGCATTCATATGATACTTCTGATCTATGTGCCAACCCTTTGAGTTTCTATAATGTAATTGATAAATCTGTGACAGGGGAAGGACTTGAAAATGAAGTTTGTACTCTCCTAAAGATTGCTTGTGAGTGTGTTAAGCCTTTACCAGACCAAAGGCCAACAATGCTTGAAGTTTACAACAATATGAGCAATGTAAGGAAGGGACAAAATTGCTCTGGTGATGACTCTGACACATTGAGGGGATTAGAATATTCTTCCTCTATTGCCATCGACGAAATTGTTGagttttaa 726 0.376 MIMGRYIHNNIVPLLGFFIEGKERLLAYPYMSNGRLSKWLHPLESEVIRLKWHDRINIALGIAKGLSWLHHTCDLGIVHFNICSECILLDENFEPKISNFGEAKFMNPNIEDNLGTMFKVNDGKKDVYDFGSVLFELMTGKTYNELSHSYDTSDLCANPLSFYNVIDKSVTGEGLENEVCTLLKIACECVKPLPDQRPTMLEVYNNMSNVRKGQNCSGDDSDTLRGLEYSSSIAIDEIVEF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01734 241 SUPERFAMILY Protein kinase-like (PK-like) 2 205 IPR011009 -
Tsu02g01734 241 PANTHER OS07G0668900 PROTEIN 1 211 - -
Tsu02g01734 241 Pfam Protein tyrosine and serine/threonine kinase 2 206 IPR001245 GO:0004672|GO:0006468
Tsu02g01734 241 ProSiteProfiles Protein kinase domain profile. 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01734 241 Gene3D Transferase(Phosphotransferase) domain 1 32 229 - -
Tsu02g01734 241 Gene3D Phosphorylase Kinase; domain 1 1 31 - -
Tsu02g01734 241 PANTHER - 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01734 Tsu-Chr2 15286973 15287698 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01734 3 210 Receptor kinase-like Gene Family AT1G27190 35.776 1.40e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu02g01734 PK_Tyr_Ser-Thr 4.9e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01734 - - mtr:MTR_4g092520 427.557