Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01733 ATGACTTTTCAAATAAAAAGGGATATTCTACTCCAAATCTTCTTGTGCCTCAGTATGTTAATGACAAGTCAGAGTTCTGAGACTGATAACATTATGAATTCTTTGGAAGATCCGTTTGATGACAAGCCCAACGATTTCCATCAATCGATCAAAGGTGGTCTTATTGTTGGTTATGTTTTTTCAGTCTCTTGTTCTGTTATGCTCACTTGTATCTTCAACTCCAAATATGCACGTTGGGTgcaattgaagaagaagaaaaagacaaGCAATCATCTAATCGAAGGAAAAGCTAAAAAATTGGGCAAATATATCAGTTTCATCATCAGCAGGAGGACACAGATGGTAGTTAATCAGATGAACGAATTGGTAAATTTCCGGCTGATACACAAAGAAAGCAAAGAGATCTCTGCTTTATTGGAAAGACTCACCTCAACAATATGGTTAGAAGAACTTTCTACTGCAACTGACTGTTTTGCTATAGACAATGCTATTGGTGTGGGAAAGATGGGAATGATGTATCAAGGAAACCTACCTAATGGTCAATTACTAGCTGTTAAGAGACTATTAAACTCTCAATTATTTAAAAGGCAGTTCCTTTCGGAAACAACGATTTTGTGCAAgtacaaacacaaaaatatagtTCCTCTACTTGGTTTCTGCATTGAAGGAAATGACAGGCTTTTGGCATATCCATACATGTCAAATGGAAGGCTTTCTAAATGGTTACATCCTTTGAAAAGTGAAGTTGTGAGATTGAAATGGCCTCAAAGAGCCAACATTGCTCTTGGAATAGCAAGAGGGTTATCATGGCTTCATCATACATGTGATTTGCATACTGTGCATTTTAATATATGCTCACAATCTATATTGCTTGATGAGAATTTTGAAcccaaaatatctaattttGGGGATGCAAAATTTATAAATCCTAACATTGAGGGGAAAATGTTTAAAGTGAATGATGGTAAGAAAGATGTGTATGACTTTGGAAGTGTGCTTTTTGAACTGATTACAGGAGAAACATATAATGAACTGACTCGTTCATGTACCGAAACTAACATATGTGGCAACCCTTCAAATTTCTATAATGCCATTGATAAATCTCTAACTGGCGAAGGATTTGAAAATGAAGTTTGTGCTCTTCTGAAGATTGCTTGTGAATGTGTTAAGCCTTTACCAGATCAAAGACCAACAATGCTTCAAGTATACAAGAATATAAGGAATGTAAAGAAGGGGCGACATGGCTGTAGTGATGATTTTGACGCAGTAATGGGATCATCAGAAATTGTTTCTTCTATTTCTACAAACGAAATTATTGAGTTATAA 1326 0.3424 MTFQIKRDILLQIFLCLSMLMTSQSSETDNIMNSLEDPFDDKPNDFHQSIKGGLIVGYVFSVSCSVMLTCIFNSKYARWVQLKKKKKTSNHLIEGKAKKLGKYISFIISRRTQMVVNQMNELVNFRLIHKESKEISALLERLTSTIWLEELSTATDCFAIDNAIGVGKMGMMYQGNLPNGQLLAVKRLLNSQLFKRQFLSETTILCKYKHKNIVPLLGFCIEGNDRLLAYPYMSNGRLSKWLHPLKSEVVRLKWPQRANIALGIARGLSWLHHTCDLHTVHFNICSQSILLDENFEPKISNFGDAKFINPNIEGKMFKVNDGKKDVYDFGSVLFELITGETYNELTRSCTETNICGNPSNFYNAIDKSLTGEGFENEVCALLKIACECVKPLPDQRPTMLQVYKNIRNVKKGRHGCSDDFDAVMGSSEIVSSISTNEIIEL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01733 441 PANTHER RECEPTOR-LIKE PROTEIN 55 40 416 - -
Tsu02g01733 441 Gene3D Phosphorylase Kinase; domain 1 117 232 - -
Tsu02g01733 441 ProSiteProfiles Protein kinase domain profile. 158 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01733 441 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 40 416 - -
Tsu02g01733 441 Gene3D Transferase(Phosphotransferase) domain 1 233 422 - -
Tsu02g01733 441 SUPERFAMILY Protein kinase-like (PK-like) 140 404 IPR011009 -
Tsu02g01733 441 Pfam Protein tyrosine and serine/threonine kinase 160 308 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01733 Tsu-Chr2 15282196 15284867 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01733 138 421 Receptor kinase-like Gene Family AT1G27190 35.144 6.57e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu02g01733 PK_Tyr_Ser-Thr 1.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01733 - - mtr:MTR_4g092550 612.068