Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01725 ATGGAATTCTCTAAACAATTCAAAGATTCATTTAGGCAAGGTCTTATTGCTGGCTATTTTTTCACAGCAACTTTTGTCATTGTTTTTTATATGTCCTATTGTCTACCCACACAAATTATCAAGATGAGGAAAAATAAGAACCTTAGACATAAGAAAACAAGAGAGGTGAACAAATTCCCTAAGCAAGACTTGAAACAAGAAAAGATCAAAGAGaaacaaaacaaagtCATACAACAAGAGAAAATGTTGCCTATGGAGTTGCTAGAGAAACGAATCCAGATCAATGAAGTTGAACGGTTGACTTATAGAATAAACTACACAAAACTTTGTCATGCAACAAACTACTTTAGTAAGGACAATATTATTGGGGTGGGAGTGAATGGAATAATGTACAAAGCAACATTTCCCAACAATTGTTGCTTGGCAATTAAGAAACTACATGATTCTGACTTGTGTATCAAAAGGTTCGAGCTAGAAATAATCATTTTGGGACACTATAGTCACCAAAACATACTTCCCTTGATTGGATTCTGCATAGAAGAAGggaaaaatgaaagaattttGGTGTATCAATACATGTCAAATGGAAGACTTTCTGATTGGTTGAATGATGATACTACAAAATTAGGATGGACAAGGGTTATTAAAATTGCACTTGGTATAGCAAGAGGTTTATGTTGTCTCCATCATAGTTTGCATAtggttcatctaagtataagcTTAGAGTGTATCTTGTTAGGGGACAATTTCGAGCCGAAAATATCCAATTTTGGAGGGGTCATGTTTATGAATAATGATTTGAACAATAGCATAGGATTTGAGAAGAAGGATGTTTTTGACTTTGGTTGTTTGCTTTTTGAGTTGATTAAGGGTAAGAAATTTGGCCAAAGACATGATTgtttaagcaataataatgtTCCGTTCGCGACGTACACATATCCAAATCCTATGAACCTATTGGAGGACCATTTTGGGTTCTATGATGGAATGGATGAAATACTAAACAAGATAGAATTTAAAGATGAGGTATCTGCTCTTCTTAGAGTTGCATGTGATTGTGTTCATCCTATCCTTGGAAAAAGGCCTACTATGCTTGAGGTGTACAATAAGATGGGAAACATATGGGAGAAAGATGACATTTTTGAAGATTATGACCAATTTGGATTAATGCATAAGTAA 1179 0.3274 MEFSKQFKDSFRQGLIAGYFFTATFVIVFYMSYCLPTQIIKMRKNKNLRHKKTREVNKFPKQDLKQEKIKEKQNKVIQQEKMLPMELLEKRIQINEVERLTYRINYTKLCHATNYFSKDNIIGVGVNGIMYKATFPNNCCLAIKKLHDSDLCIKRFELEIIILGHYSHQNILPLIGFCIEEGKNERILVYQYMSNGRLSDWLNDDTTKLGWTRVIKIALGIARGLCCLHHSLHMVHLSISLECILLGDNFEPKISNFGGVMFMNNDLNNSIGFEKKDVFDFGCLLFELIKGKKFGQRHDCLSNNNVPFATYTYPNPMNLLEDHFGFYDGMDEILNKIEFKDEVSALLRVACDCVHPILGKRPTMLEVYNKMGNIWEKDDIFEDYDQFGLMHK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01725 392 Coils Coil 61 81 - -
Tsu02g01725 392 Gene3D Phosphorylase Kinase; domain 1 76 192 - -
Tsu02g01725 392 Pfam Protein tyrosine and serine/threonine kinase 119 301 IPR001245 GO:0004672|GO:0006468
Tsu02g01725 392 ProSiteProfiles Protein kinase domain profile. 116 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01725 392 SUPERFAMILY Protein kinase-like (PK-like) 97 369 IPR011009 -
Tsu02g01725 392 Gene3D Transferase(Phosphotransferase) domain 1 193 271 - -
Tsu02g01725 392 Gene3D Transferase(Phosphotransferase) domain 1 272 381 - -
Tsu02g01725 392 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 4 375 - -
Tsu02g01725 392 PANTHER RECEPTOR-LIKE PROTEIN 55 4 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01725 Tsu-Chr2 15181550 15183368 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01725 90 390 Receptor kinase-like Gene Family AT1G27190 29.721 4.20e-36 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tsu02g01725 PK_Tyr_Ser-Thr 2.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01725 - - gmx:102663800 494.582