Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01703 ATGTTGGAGTCTTTACTAACTTGTTCCCAAAGCCTCAAGGGATATGACCTGACAAAACAAAAGAATCCTTGTTATTCTCGTGCTGCTTCGCGAATTTGTTCGAATTCTATGTTTACTCTTTCATCAGTTGACAAGCAAGTTCCTATTACATCACATATATGTTGTCATAGTACAGCTTTATCAGATAAATTCACTAGAAGAGCTTCTCTGGATGTTCCTTCATTTTCTGGTCGGAAATTATCCTATTTCACTAAGTATAGGTCACTACAATGGGAACGGTTGCGTAGAAATGCAACATATGATGTTGCTGGTGCTGTTGAAGTCATCAATGATTTAGGATTGGATACTCTTACTTTCTTGGCAGTTACTGTCTTTATCGTCCCCTCGTTCAAGTTAATTAAAGCCAGTCCTATACTTGGTTTCTTTTGTGCCGGGGTGATTCTCAATCAGTTTGGTTTAATCAGGAACCTTGAAGATGTTAAAGTTTTGTCTGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAACTTTCACTTGCACGTCTTAAAGCCCTTGCAAAATATGCCTTTGGAATGGGACTGACTCAGGTTCTACTATCTACTTTAGCATTCACTGCTTTTGAGCTTCCACCAAATGGggctgttggaacaaaaatttTGGAATTTCTTTTCCACTCAAGGTCTGATCTGGTGAACATCAGAAGTATCGATGAAGCTGTAGTGATTGGGGCTGCTCTCTCTCTGTCATCTTCGGCATTTGTTTTACAGCTTCTTGCAGAGAAAGGCGAGCTTCCTACAAGGCTTGGTTCAGCAACTCTTGGGATACTTCTTTTGCAGGACATAGCTGTTGTGCCTCTTTTGGTCATACTTCCAGTACTTGAGAGCCAGAATATGGCTGAGGGAAGTATTTGGCCGATGCTTGCTCAAGAAAGTTTGAAGGCATTAGGTGGATTGGGCCTGCTTTCTTTTGGAGCAAAGTTTTTTCTCAGAAGAGTTTTTGAGGTTGTAGCAGATACAAGAAGTTCAGAGGCTTTTGTCGCTCTTTGCTTGCTGACTATTGCTGGGACTTCACTAATCACACAGAAATTGGGCTTCAGTGATACGCTTGGAGCATTTTTAGCTGGGGCAATCCTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTGCTGCTCGGGTTGTTTTTTCTAACTACAGGGACTTCAATTGACATGCAGGTTCTCTTGAGAGAGTGGCCAAATGTACTTGCGCTTTTGGCGGGTTTAATTACTATCAAGACATTGATTATAACTGCGATTGGTCCTCGTGTTGGCCTTACTTTAAAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGTGGAGAGTTTGGATTTGTAGTATTCTCTTTGGCGAATAGTCTTGGGGTGCTTCCACTTGAGCTCAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCGTTAACCCCATTTCTGAATGAAGCTGGAAGGAGGGCTGCTAGCTTTATTGAAGACAATTATGAAGTTGACAATAAAGAGAAAGATTCTGAGATGATTAACTTTGAAGTTAATGAACCTGTTGTCGTCCTTGGATTTGGACAAATGGGGCAGGTCCTTGCAAATTTGCTGTCCAACCCAATGGCTTCAGGAGGAGATAGTGATGGAATAGGCTGGCCTTATGTTGCATTTGATATTGACCCCAGGGTTGTAAAGGCAGCTAGAAAACAAGGTTTTCCTATTCTCTATGGGGATGGATCACGTCCAGCTGTTCTCCAATCTGCCGGTATCTCATCTCCAAAAGCTATCATGATTATGCTCACTGAGAAGACAAAGTCAATTGAAGCTGTTCAGAGGCTACGGCTGGCTTTTCCTGCAGTAATAATCTCTTCTCGACCCTACCCCTACCCCATTCATAGCCTCTTTGTTTCTTATGTCAACTAA 1971 0.4145 MLESLLTCSQSLKGYDLTKQKNPCYSRAASRICSNSMFTLSSVDKQVPITSHICCHSTALSDKFTRRASLDVPSFSGRKLSYFTKYRSLQWERLRRNATYDVAGAVEVINDLGLDTLTFLAVTVFIVPSFKLIKASPILGFFCAGVILNQFGLIRNLEDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLTQVLLSTLAFTAFELPPNGAVGTKILEFLFHSRSDLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRLGSATLGILLLQDIAVVPLLVILPVLESQNMAEGSIWPMLAQESLKALGGLGLLSFGAKFFLRRVFEVVADTRSSEAFVALCLLTIAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQVLLREWPNVLALLAGLITIKTLIITAIGPRVGLTLKESVRIGLLLSQGGEFGFVVFSLANSLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEDNYEVDNKEKDSEMINFEVNEPVVVLGFGQMGQVLANLLSNPMASGGDSDGIGWPYVAFDIDPRVVKAARKQGFPILYGDGSRPAVLQSAGISSPKAIMIMLTEKTKSIEAVQRLRLAFPAVIISSRPYPYPIHSLFVSYVN 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01703 656 Pfam Sodium/hydrogen exchanger family 118 503 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu02g01703 656 Gene3D - 532 645 - -
Tsu02g01703 656 Pfam TrkA-N domain 537 637 IPR003148 GO:0006813
Tsu02g01703 656 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 49 641 - -
Tsu02g01703 656 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 537 642 IPR036291 -
Tsu02g01703 656 Gene3D - 111 510 IPR038770 -
Tsu02g01703 656 ProSiteProfiles RCK N-terminal domain profile. 536 656 IPR003148 GO:0006813
Tsu02g01703 656 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 49 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01703 Tsu-Chr2 14996147 15004897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01703 6 646 Inorganic Solute Cotransporters AT4G04850 71.517 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01703 - - aprc:113858933 974.541