Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01695 ATGGATACCTATCAATATCCACCGTCATATCCAGATTCCGGCAACTCATCGCCGCGTTCGAGAGAAATCGATTTCGATAATCCCTCCTCATGGGAGGAGCAACAGAATTACAAAGCAAAGTTCATGTGTAGTTACGGTGGAAAGATCCAACCGCGCAGCCATGACAACCAGCTTTCTTATATCGGCGGCGACACCAAAATACTAGCCGTCGATCGCAACATCAAGTTTCAAGCCTTTCTCTCGAAGCTATCCACTCTCTGCGACGCAATTCAACAAGATGTAACGTTCAAGTACCAGCTTCCCGGTGAAGAACTTGATGCACTTATCTCCGTTACAACGGAAGATGATCTCGAACACATGATGCATGAATACGATCGTCTCTATCGCCCTTCTTCAAAACCGGTTAGAATGAGGCTTTTCATATTCATCTCTCCGAATTCTGGTTCGGTTTCGGTTTCTCAACCCGATCCACTTAAAGCTCATTCCAACGCTGATTTTCTCTTTGGTCTTGATAACAAAACTATAGCTCCACCGTCTCATCCACCTTCATATGCTGCTGCTGTGAAATATCATGATCCTGTGGCGGATCTTGTTACTCCGGTAACTGAGTATCCGCCACGTGGAGTTGTTGATGATAGTGTTGAGATTCAGAGGCAGTTACAGCGTTTACAGGTTTCTGAGAATGAGCAGAACTTGTATCGAAGAAGTGTAGATGGATTCACCGGAGGTTTTGCTGCTGCTGCTACCGTTGCTCCTGGAGGTGATTATTACATGCAGAAGATGCCGGAGAAAGTTGCGCCGTCTAATTCTCCAACTGCTGCTCATCATCCTGCAGGTTACTGgccggaaaagcaattttcaggCGAAGGTTTTCCGATGCAGGGGATAAATACTTCCGGTGGAGGGGATCAGCATGTATACATGATGCCGCCGCCGGGGACATTCTACCACGCGCCTCAGATGATACGTCCACCGACAGCACAGGTGAGTCAGGGATACTACGCTGTGCAGCGAATGTCTACTGATGGATACCGGGAACAGCCTGTATACGGCGGCGTTCCGCCTCAGAGCGTGGCGTTTTCGTCGGCGGGTCAGGGGAGTTTGGCACCGGCTCAGCCGGTTAAGCCTTCGGCTTATGCGGAAGGATATGGCTTAGTTAGGCCAGCTGGTGTAGCGGATAATGCGGGCAGTGGTGGATATGCGCAAGTGGCGTATGATAGTACAAGTGGGAGACATGTTTATTATACTGCGCCGGGTGGTATGGTACATGCGCCGCAGTATCAAGGGGTTGCTCCGGTATTCAGCAATGATATGAGAACGGCTGCAGTTCCTGTGGGCCAGGATCCTAAAGTGGTAAACAAAAGTTCACAAGGATCTGTGTGA 1383 0.4852 MDTYQYPPSYPDSGNSSPRSREIDFDNPSSWEEQQNYKAKFMCSYGGKIQPRSHDNQLSYIGGDTKILAVDRNIKFQAFLSKLSTLCDAIQQDVTFKYQLPGEELDALISVTTEDDLEHMMHEYDRLYRPSSKPVRMRLFIFISPNSGSVSVSQPDPLKAHSNADFLFGLDNKTIAPPSHPPSYAAAVKYHDPVADLVTPVTEYPPRGVVDDSVEIQRQLQRLQVSENEQNLYRRSVDGFTGGFAAAATVAPGGDYYMQKMPEKVAPSNSPTAAHHPAGYWPEKQFSGEGFPMQGINTSGGGDQHVYMMPPPGTFYHAPQMIRPPTAQVSQGYYAVQRMSTDGYREQPVYGGVPPQSVAFSSAGQGSLAPAQPVKPSAYAEGYGLVRPAGVADNAGSGGYAQVAYDSTSGRHVYYTAPGGMVHAPQYQGVAPVFSNDMRTAAVPVGQDPKVVNKSSQGSV 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01695 460 Pfam PB1 domain 54 141 IPR000270 GO:0005515
Tsu02g01695 460 SUPERFAMILY CAD & PB1 domains 54 151 - -
Tsu02g01695 460 SMART PB1_new 53 144 IPR000270 GO:0005515
Tsu02g01695 460 PANTHER OS05G0427100 PROTEIN-RELATED 1 455 - -
Tsu02g01695 460 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 455 - -
Tsu02g01695 460 CDD PB1_UP2 42 142 - -
Tsu02g01695 460 Gene3D - 59 143 - -
Tsu02g01695 460 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01695 Tsu-Chr2 14959182 14961099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01695 37 145 MAP Kinase Kinase Kinase AT5G57610 42.202 9.91e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01695 - - adu:107480527 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01695 02 14959182 14961099 Tsu08g04256 08 60546746 60548477 PCT