Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01682 ATGGGTCCAGAGTTGGTTCTAGATGCCattgaaaaagttaaattaatCCGGGATCGTTTGATAACAGCTCAAAGTAGGCAAAAGTCTTATTCTAACAAGAAGCGCCGTCCCGTAGAGTTCACTGTGGGAGATCATGTATTTTTACGTGTTTCACCAATGAAAGGAGTTTTGCGGTTTGGCAAGAAGGGTAAATTAAGTCCAAGGTTCATTGGGCCGTTTGAGATTTTGGAGAGAGTCGGGCCTGTAGCTTATCGCTTAGCACTTCCGCCGGATCTGTCAGGAGTTCACCCGGTCTTTCATATTTCAATGCTTCGGAAGTACCTTTATGATGCTTCACATGTTATTAATCATGATGATGTTCAATTGGATGAGCATTTGTCATACACCGAATATCCGATAGCAATAGTAGATAAGGAAGTTAGAAAACTACGCTCAAAGAATATCGTTTCAGTTAAGGTTCTTTGGAAAGGACCATCAGGTGAAGAAGCAACTTGGGAATCGGAAGAAGTTATGCGTACAAAATATCCACACTTATTTGAAACTCAAGGAACCATTTCCACACTCCAATTAATCCATTTTGCAAACTCATTGTCATTTGATTACCCCTACTTTAACAATGGCGATGTCAATTGGGAAGGTGATGCTTCTCCTTATAAAGGAGCTATTCAAGTCACTTCCAACACCAttgatcaaaacaacaattacaGCGTTGGTCGAGTCACGAGTTTTAAACAGATGCATCTCTGGGATTTGAACTCTGGAAAACTCTCTGACTTCACCACCAAATTTTCCTTCGttgttttttcaaaaacaaaggAATATGGAGATGGAATGGCATTCTTCTTGTCCGATCCAAATCTCCCACTTTTGAAGAATATCAAAGAAGGTGGCGGTCTTGGCCTTGTGGATGGAGACCAAGTACTAAAATCAACTCAACACTCATTTGTGGCAGTAGAGTTTGACACCTATAATAATCCATGGGACCCTTCTGGTGAAGGCACTCATGTTGGCTTGAATTTCAACTCTATGAGGTCTAACATAACTAAGCCATGGTTGACGAATATTCTGAAATGGAGAAGTTACAATTGCAGCATTAAATACAATTCCAGCACTCTCAATTTGAGGGTGTCATTCACGATGtatgataatgatgataaaCCAGTTGAAGAGCACATATCACATAATGTTGATTTGAGAGATTTCTTACCTGAGAGGGTTATTGTTGGATTCTCTGCTGCAACTGGAATATTGTATGAGGTACATACTCTTCGGTCATGGTCATTTAGTTCAAGTCTACTAAGTGATGAGAACAGATATCAGATAGCGGCACCAACCTCCAGTCCTGTAATTTCTGAACAAGGAAACAAGATAGGATTGAAGGTAGGGATTGGAATTGGTACAGGCTTGGCTGTAAGTTTATCAGGGCTGGTTTGTACTCTATTATGGAAAAGGAGTAGAGGGAGGAAAAGCGAGTTCGGTTTCGATCTCAACATGAATGATGAATTCCAAAAGGGATCTGGACCTAAGAGGTTTTTCTACAATGAACTAGTGAGTGCAACAAACAAATTTTCAGAGTCAGATAAAGTGGGACAAGGTGGTTTTGGTGGTGTATACAAAGGTTATTTGAAAGACTTGAACTCCTATGTTGCTATCAAGAGAATGTCAAAAGAGTCTAGACAAGGAGTACTAGAATATGTGACCGAAGTGAAAGTCATAAGTCAATTGAGACACAGAAATCTAGTACAACTTCTTGGTTGGTGTCACAGGAAGAATGATTTTCTTCTAATATACGAGTTTATGTCAAATGGAAGCTTAGATTCCCATCTATACGGTAAAAAAAGCATCTTGACATGGACAGCGAGGTATAACATCGCATTGGGTTTGGCTTCAGCATTGCTTTACCTACAGGAAGAATGGGAGCTGTGTGTTCTTCACAGGGACATTAAATCAAGTAACATTATGTTGGATTCATGTTTTAACGCCAAGCTTGGTGATTTTGGTTTAGCAAGGCTGGTGGATCATGAGAAAGGGTCACAAACCACACTTATAGCTGGAACAAGGGGTTATATTGCACCTGAATATTTCACATCAGGAAAGGCTACTAAAGAATCTGATATATACAGCTTTGGTGTAGTGTTATTGGAAATAGCCACTGGAAGGAAAGCTattgaaagagaagaaaaagaggGTCAAATAAGTGTAGTTGAGTGGGTTTGGGATCTATATGGATTTGGAAAATTCCTTCAAGCAGCTGACCCTAAGTTATGTGGAGCATTTGATGAGCAGCAATTGGAACATTTGGTGATTGTTGGCCTTTGGTGTGTCCATCCAGATTATTCATTTAGGCCTTCTATAAGACAAGTGATTCAGGTGCTCAAATTTGAGTCTTCTTTACCAATTCTCCCAGAAAAAATGCCTGTGCCAACCTATCTTCCTCCAAGCATAAAGGCACTTTTTTCTTCAGTTTCATCCACCTATTGGACCAAAAGTTAG 2493 0.3879 MGPELVLDAIEKVKLIRDRLITAQSRQKSYSNKKRRPVEFTVGDHVFLRVSPMKGVLRFGKKGKLSPRFIGPFEILERVGPVAYRLALPPDLSGVHPVFHISMLRKYLYDASHVINHDDVQLDEHLSYTEYPIAIVDKEVRKLRSKNIVSVKVLWKGPSGEEATWESEEVMRTKYPHLFETQGTISTLQLIHFANSLSFDYPYFNNGDVNWEGDASPYKGAIQVTSNTIDQNNNYSVGRVTSFKQMHLWDLNSGKLSDFTTKFSFVVFSKTKEYGDGMAFFLSDPNLPLLKNIKEGGGLGLVDGDQVLKSTQHSFVAVEFDTYNNPWDPSGEGTHVGLNFNSMRSNITKPWLTNILKWRSYNCSIKYNSSTLNLRVSFTMYDNDDKPVEEHISHNVDLRDFLPERVIVGFSAATGILYEVHTLRSWSFSSSLLSDENRYQIAAPTSSPVISEQGNKIGLKVGIGIGTGLAVSLSGLVCTLLWKRSRGRKSEFGFDLNMNDEFQKGSGPKRFFYNELVSATNKFSESDKVGQGGFGGVYKGYLKDLNSYVAIKRMSKESRQGVLEYVTEVKVISQLRHRNLVQLLGWCHRKNDFLLIYEFMSNGSLDSHLYGKKSILTWTARYNIALGLASALLYLQEEWELCVLHRDIKSSNIMLDSCFNAKLGDFGLARLVDHEKGSQTTLIAGTRGYIAPEYFTSGKATKESDIYSFGVVLLEIATGRKAIEREEKEGQISVVEWVWDLYGFGKFLQAADPKLCGAFDEQQLEHLVIVGLWCVHPDYSFRPSIRQVIQVLKFESSLPILPEKMPVPTYLPPSIKALFSSVSSTYWTKS 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01682 830 ProSitePatterns Protein kinases ATP-binding region signature. 529 552 IPR017441 GO:0005524
Tsu02g01682 830 SUPERFAMILY Concanavalin A-like lectins/glucanases 195 438 IPR013320 -
Tsu02g01682 830 Pfam Protein kinase domain 524 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01682 830 PANTHER - 181 829 - -
Tsu02g01682 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Tsu02g01682 830 Pfam Legume lectin domain 196 433 IPR001220 GO:0030246
Tsu02g01682 830 ProSiteProfiles Protein kinase domain profile. 523 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01682 830 Gene3D Phosphorylase Kinase; domain 1 508 599 - -
Tsu02g01682 830 Gene3D Transferase(Phosphotransferase) domain 1 600 812 - -
Tsu02g01682 830 CDD lectin_legume_LecRK_Arcelin_ConA 197 426 IPR001220 GO:0030246
Tsu02g01682 830 ProSitePatterns Legume lectins alpha-chain signature. 402 411 IPR000985 -
Tsu02g01682 830 SMART serkin_6 523 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01682 830 ProSitePatterns Legume lectins beta-chain signature. 316 322 IPR019825 -
Tsu02g01682 830 Gene3D - 194 443 - -
Tsu02g01682 830 CDD STKc_IRAK 529 793 - -
Tsu02g01682 830 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 181 829 - -
Tsu02g01682 830 SUPERFAMILY Chromo domain-like 94 173 IPR016197 -
Tsu02g01682 830 SUPERFAMILY Protein kinase-like (PK-like) 507 816 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01682 Tsu-Chr2 14813107 14821301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01682 186 810 Receptor kinase-like Gene Family AT5G10530 47.188 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu02g01682 Pkinase 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01682 - - gmx:100780181 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01682 02 14813107 14821301 Tsu02g01682 02 14813107 14821301 ECH