Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01681 ATGAAACTAAACAACTCTGATATAGCTAAGCTAGACACAATGGTTCATATATTCTGTTATGCAAGGGAAACAATTTTGCTTTTCCTGATAGTCCCTCTTGCACATGCTTACCCTGTGTCTTTTCATTACCCTAGGTTTAGCAAAAATAGTAAAGATCAGCCAAAGCTTGAAGGCGATGCCGCCATTGTAGATTCTGACTATGTTATTCGACTCACTCGGTACCTTGCTGACCCAGATAAGGCTTCTGGTGTTGGTCGAGTCAGAAGTCCCGAACTTATCAAACTTTATGACAATATAACAAATCAACTGTATGACTTCAGTGCcaagttttcttttattatattttcaaatcACAGTAAGCATGGAGATGGCTTGGCATTCTTCCTTGCAAGCTCAAAACTTCCAACAACAAATCAGATAGGAGGTGGAGGGGGTTTTGGTCTTATGAATGCAGGCGAAATTGCTATAAACTCTGAGTATTCATTTGTGGCAGTGGAGTTTGATACTCACTACAATTATTGGGACCCAACAAATGTCAACCATGTGGGAGTGATTGTCAATTCTGTGGTGTCCAATAAACATGTTGAATGGTCCGCAGATGTTTCAAAAAGGAAATTTTATCATTGTAGCATAGAATATAGTTCCAGAAACAAAAATCTGAATGTTTCTTTCACTGGAAAGGGATTCAATGAAGAGCAGGAGGAGCAGAGGTTTTCACACACCATTGATCTAAGAGAGTATTTACCAGAGGATGTTATTGTTGGCATATCAGCTTCAACAGGAGCTGCAGATGAGGAACATATGCTGCGGTCGTGGTCTTTTAGTACTCGGTATGGAGATGCTCCTGAGAAGAAAAATAACGTAACCATAACTATTTTGTTGGAAGTATTAGGAAGTGGTGTCGTAATGATATCTTTGATTTGCATAATAATGTTATTCATTTCATTGTGGAAGAAGAATaaaggaaaagaagaagaacctgCTACGTCAGAAACCATCTCTGATCAGAATATGGATGAAGAATTCCAAATGGGTGCTGGGCCTAAGAAATTTAGTTATCAGGAATTACTGGATGCAACAAACAACTTTGAAGAGACACTGAAGCTTGGTGAAGGTGGTTTTGGTGGTGTTTACAAGGGTTATTTTACAGACACAAACTCAGTTGCAGCCATAAAGAGGAGGATATCACCAAATGCACGGCAGGGTATAAAGCAATACTCAGCAGAAGTGAAGATCATTAGCCAATTGAGACATAGAAATTTGGTGAAACTCAATGGTTGGTGCCACAAGAAGAATGAACTTATCCTAATATACGAATACATGCCTAATGGCAGCTTAGATTTTCATCTTTTTCGTGGAGGTAGCATCTTGTCATGGCATTTGAGGTACAATATAGCTCTTGGGTTGGCCTCAGCATTGCTTTATTTGCAGGAAGAATGGGAAAAATGTGTGATTCATAGGGACATAAAATCAAGCAACATAATGTTGGACTCCAACTTCAATACTAAGCTTGGGGATTTTGGGCTAGCTAGGCTAATGGATCATGAGAAAGGGTCAGAAACTACAGTTGTGGCTGGAACCAGAGGTTACCTAGCTCCTGAATACATGGACACAGGCAAGCCCAGAAAGGAATCTGACATATTCAGTTTTGGGGTTGTTTTGTTGGAGATAGCCTGTGGAAAAAAGGCCATACACTACCAAGAATTGGAGGATGAAGTATCATTAGTTGAGTGGGTTTGGGAGCTatatggattaaaaaaaatcattgcaGCAGCAGATCCAAAACTATGTGGTCAATTTGATGTGAAGGAATTGGAATATTTGCTAGTAGTTGGACTTTGGTGTGCTAATCCAGATAACACATCAAGACCATCTATAAAGAAAGTGATTAAAGCGCTAAACTTTGAAGTTCCATTACCAATTCTCCCACAAAATATGCCATCTCTAGCTTCTCTGTCTGCCACAACAAGTGAGCAATTTTTACCAGTTTTTCCTTTCTTTAGGTCTACAGGTTAG 2016 0.3834 MKLNNSDIAKLDTMVHIFCYARETILLFLIVPLAHAYPVSFHYPRFSKNSKDQPKLEGDAAIVDSDYVIRLTRYLADPDKASGVGRVRSPELIKLYDNITNQLYDFSAKFSFIIFSNHSKHGDGLAFFLASSKLPTTNQIGGGGGFGLMNAGEIAINSEYSFVAVEFDTHYNYWDPTNVNHVGVIVNSVVSNKHVEWSADVSKRKFYHCSIEYSSRNKNLNVSFTGKGFNEEQEEQRFSHTIDLREYLPEDVIVGISASTGAADEEHMLRSWSFSTRYGDAPEKKNNVTITILLEVLGSGVVMISLICIIMLFISLWKKNKGKEEEPATSETISDQNMDEEFQMGAGPKKFSYQELLDATNNFEETLKLGEGGFGGVYKGYFTDTNSVAAIKRRISPNARQGIKQYSAEVKIISQLRHRNLVKLNGWCHKKNELILIYEYMPNGSLDFHLFRGGSILSWHLRYNIALGLASALLYLQEEWEKCVIHRDIKSSNIMLDSNFNTKLGDFGLARLMDHEKGSETTVVAGTRGYLAPEYMDTGKPRKESDIFSFGVVLLEIACGKKAIHYQELEDEVSLVEWVWELYGLKKIIAAADPKLCGQFDVKELEYLLVVGLWCANPDNTSRPSIKKVIKALNFEVPLPILPQNMPSLASLSATTSEQFLPVFPFFRSTG 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01681 671 SUPERFAMILY Protein kinase-like (PK-like) 347 648 IPR011009 -
Tsu02g01681 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 278 IPR013320 -
Tsu02g01681 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Tsu02g01681 671 Gene3D Transferase(Phosphotransferase) domain 1 441 651 - -
Tsu02g01681 671 SMART serkin_6 363 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01681 671 CDD STKc_IRAK 369 634 - -
Tsu02g01681 671 ProSitePatterns Legume lectins beta-chain signature. 163 169 IPR019825 -
Tsu02g01681 671 CDD lectin_legume_LecRK_Arcelin_ConA 39 277 IPR001220 GO:0030246
Tsu02g01681 671 Pfam Protein kinase domain 364 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01681 671 ProSiteProfiles Protein kinase domain profile. 363 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01681 671 Pfam Legume lectin domain 39 286 IPR001220 GO:0030246
Tsu02g01681 671 ProSitePatterns Protein kinases ATP-binding region signature. 369 392 IPR017441 GO:0005524
Tsu02g01681 671 Gene3D Phosphorylase Kinase; domain 1 348 440 - -
Tsu02g01681 671 PANTHER - 24 670 - -
Tsu02g01681 671 Gene3D - 38 279 - -
Tsu02g01681 671 PANTHER LECTIN RECEPTOR KINASE 24 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01681 Tsu-Chr2 14810109 14812124 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01681 24 647 Receptor kinase-like Gene Family AT5G10530 44.497 1.07e-167 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu02g01681 Pkinase 5.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01681 - - cam:101492002 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01681 02 14810109 14812124 Tsu02g01681 02 14810109 14812124 ECH