Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01679 ATGGTCTGTGTAGCACCAAAAGCAATGCATGTCCAGTTCCACAATTATTTCTTGCTATCTATTTTCTTACTctcaattaatttgattattccAAATGTATCCTCATTGAACTTTAACTTCACTAGTTTTGATCCTGATGATAAAAGCATAATCTATGAAGGATCAGCAAAACCTGTATCATCAGCTATCGACCTTACTATGAACTTTGGAAGCATTGGTAGAGCCACATATTACAAACCTATCCATTTGTGGGATAAAAGTACAAAAAATCTCACAGATTTCACATCCCATTTCACTTTTACCATAAATTCACAGAATAGAAGACATTATGGAGATGGTATGGCATTCTTTCTTGCCCCTTCTGGTTCAAAGATGCCTAATGCTACAAAAGGTCGTTCTATGGGTCTAACACTTGATGACCAAGCATTGAACTCAACTAAAACTAATCCATTTGTTGCTGTTGAGTTTGATATCTATCGGAATTCTTTTGATCCACCACATGAACATGCCGGAATCGACATCAACTCAATGTTATCTGTTGCTAATGTGACATGGTTGGCTGATATCACAGAAGGTAAACTCAATGAGGCTTGGGTAAGTTACAATGCTAGTTCATTGAATCTAAGTGTTATATTCACTGGTTTTAATAATGTAACTTCTACCACTGTGAATCAACATATATCTTCCATTGTTGATCTCAGACTTTATCTGCCAGAATTTGTTACTATTGGCTTCTCAGCTGCCACAGGAAATGCAACTGCTCTTCATACTCTCAATTCGTGGGATTTTAGCTCAACTTTAGAATCACAACAAgataacaacaaaacaaacatagcAGTAGGATTGGGAATTGGTGGATTTGTTTTGATTGCTGTGTTTGgtttaatttcaatttacttGTGGAAGAAGTGGAAGAAaggaaaagaagaggaaaatggTGATTTTGAAGAGTACATGGGTGAGGATTTTGGAAGTGGAGGACCCAAGAAGTATACATATGCAGAATTAGCATATGCAGCTAATAATTTCAAAGATGAACATAAGCTAGGACAAGGAGGATTTGGAGGTGTTTATAGAGGTTTTCTTAAACACACAAAATCTTATGTTGCTATTAAGCGGGTGTTAGAAGATTCTCGTCAAGGGATAAAGGAGTTTTCATCAGAAGTAACGATTATTAGCAAATTAAGGCATAGAAATCTAGTGCAACTGTTAGGTTGGTGTCATGAAAGAAAAAAGCTCTTGCTTGTATATGAGTACATGCCAAATGGTAGTTTAGACATTCATCTTttcaaggaacaaagtttgtTAAAATGGGGTGTTAGATATAATATAGCTAGAGGCTTGGCTTCTGCATTGTTATATTTACATGAAGAATGGGAACAATGTGTTTTACATAGAGACATAAAAGCAAGCAACATAATGTTGGATTCAGAGTTCAATGTAAAACTAGGAGATTTTGGTTTAGCAAGGTTTGTAGATCATGCAAAAGGTGCACAAACTACAGCTTTAGCAGGAACTTTCGGATACGTGGCTCCTGAATGTGCTACCATGGGAAGGTCTAGTAAAGAAACAGATGTGTATAGTTTTGGAATTGTTACTTTAGAGATAGCATGTGGAAGAAAATCTATTATTAAGGCccaagaaaatgaaataagtatTGTGGAGTGGGTTTGGGGGCTATATGGAAGTGGTAGAATTCTTGAAGCAGTAGATCCAAGACTAGGTGAAGATTTTGATGAGGAACAAATTAAGTGCTTAATGATTGTTGGTCTTTGGTGTACTCATCCTGATCCTAATAATAGGCCTTCAATAAGACAAGCTACTCAAGtgcttaattttgaagctacaTTGCCTAATCTTCCATCAAGTATGCCTGTACCAACATATCTTGAGGGTCCTTTGAAGTCATTCACTACTCCATTCAGCATAAATGGTTCAGAGGAAGGTCAAAACACAAACTCATCTGGTATAACTACTTCTGGTGGTTCTCCTTCTGATTCACTTGTGTATTATagttctaaataa 2025 0.3417 MVCVAPKAMHVQFHNYFLLSIFLLSINLIIPNVSSLNFNFTSFDPDDKSIIYEGSAKPVSSAIDLTMNFGSIGRATYYKPIHLWDKSTKNLTDFTSHFTFTINSQNRRHYGDGMAFFLAPSGSKMPNATKGRSMGLTLDDQALNSTKTNPFVAVEFDIYRNSFDPPHEHAGIDINSMLSVANVTWLADITEGKLNEAWVSYNASSLNLSVIFTGFNNVTSTTVNQHISSIVDLRLYLPEFVTIGFSAATGNATALHTLNSWDFSSTLESQQDNNKTNIAVGLGIGGFVLIAVFGLISIYLWKKWKKGKEEENGDFEEYMGEDFGSGGPKKYTYAELAYAANNFKDEHKLGQGGFGGVYRGFLKHTKSYVAIKRVLEDSRQGIKEFSSEVTIISKLRHRNLVQLLGWCHERKKLLLVYEYMPNGSLDIHLFKEQSLLKWGVRYNIARGLASALLYLHEEWEQCVLHRDIKASNIMLDSEFNVKLGDFGLARFVDHAKGAQTTALAGTFGYVAPECATMGRSSKETDVYSFGIVTLEIACGRKSIIKAQENEISIVEWVWGLYGSGRILEAVDPRLGEDFDEEQIKCLMIVGLWCTHPDPNNRPSIRQATQVLNFEATLPNLPSSMPVPTYLEGPLKSFTTPFSINGSEEGQNTNSSGITTSGGSPSDSLVYYSSK 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01679 674 CDD lectin_legume_LecRK_Arcelin_ConA 36 267 IPR001220 GO:0030246
Tsu02g01679 674 Gene3D Transferase(Phosphotransferase) domain 1 420 632 - -
Tsu02g01679 674 MobiDBLite consensus disorder prediction 640 674 - -
Tsu02g01679 674 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 273 IPR013320 -
Tsu02g01679 674 Pfam Protein kinase domain 343 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01679 674 Pfam Legume lectin domain 35 276 IPR001220 GO:0030246
Tsu02g01679 674 Gene3D - 33 282 - -
Tsu02g01679 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Tsu02g01679 674 ProSiteProfiles Protein kinase domain profile. 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01679 674 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Tsu02g01679 674 SMART serkin_6 343 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01679 674 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Tsu02g01679 674 CDD STKc_IRAK 349 612 - -
Tsu02g01679 674 ProSitePatterns Legume lectins alpha-chain signature. 237 246 IPR000985 -
Tsu02g01679 674 SUPERFAMILY Protein kinase-like (PK-like) 328 630 IPR011009 -
Tsu02g01679 674 PANTHER RECEPTOR LECTIN KINASE 20 648 - -
Tsu02g01679 674 PANTHER - 20 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01679 Tsu-Chr2 14795854 14797930 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01679 20 629 Receptor kinase-like Gene Family AT5G10530 49.204 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu02g01679 Pkinase 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01679 - - mtr:MTR_4g093080 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01679 02 14795854 14797930 Tsu02g01679 02 14795854 14797930 ECH