Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01678 ATGGATGAAGAATTCCAAATGGGTGCTGGACCTAAAAAGATTAGTTATCCGGAATTATTGAATGCAACAAACAACTTTGACGAGACACTGAAGCTTGGTGACGGTGGTTTTGGTGGTGTTTATAAAGGTTATTTTAAAGACACAAACTCCGTTGCAGCTATAAAGAGGAGGAAATCAGCAGATTCAAGGCAGGGTATAAAGCAATACTCAGCTGAAGTGAAGATCATTAGCCAATTGAGACATGGAAATTTGGTGAAACTCAATGGTTGGTGCCACAAGAAGCATGAACTTATCCTAATATATGAATACATGCCTAATGGCAGCTTAGATTTTCATCTTTTTCGTGGAGGTAGCATCTTGTCATGGCATTTGAGGTACAATATAGCTCTTGCGTTGGCCTCAGCATTGCTTTATTTGCAGAAAGAGTTGGAAAAATGA 438 0.3904 MDEEFQMGAGPKKISYPELLNATNNFDETLKLGDGGFGGVYKGYFKDTNSVAAIKRRKSADSRQGIKQYSAEVKIISQLRHGNLVKLNGWCHKKHELILIYEYMPNGSLDFHLFRGGSILSWHLRYNIALALASALLYLQKELEK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01678 145 SUPERFAMILY Protein kinase-like (PK-like) 8 140 IPR011009 -
Tsu02g01678 145 Gene3D Transferase(Phosphotransferase) domain 1 3 145 - -
Tsu02g01678 145 PANTHER LECTIN RECEPTOR KINASE 1 145 - -
Tsu02g01678 145 PANTHER - 1 145 - -
Tsu02g01678 145 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Tsu02g01678 145 Pfam Protein kinase domain 29 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01678 145 ProSiteProfiles Protein kinase domain profile. 26 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01678 Tsu-Chr2 14793366 14793803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01678 1 145 Receptor kinase-like Gene Family AT5G10530 53.103 2.45e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu02g01678 Pkinase 1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01678 - - cam:101492002 228.409