Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01677 ATGGATCACGAGAAAGGGTCAGAAACTACAATTGTGACCGGAACCAGGGGTTACCTAGCTCCAGAATACATGGACACAGGCAAGGCTAGAAAGGAATCCGACATATTCAGTTTCGGGGTTGTTTTGTTGGAGATATCCTGTGGAAAAAAAGCCATACACCACCAAGAATTGAAGGGTGAAGTATCACTGGTCGAGTGGGTTTGGAAGCTATACGGATTGAGAAATATCACTGTAGCAGCAGATCCTAAACTATATGGGCAATTTGATGCGAAGGAATTGGAATGGTTGCTAGTAGTTGGACTTTGGTGCGATAATCCAGATAACACATCAAGACCATCTATAAAGAAAGTGATTAAGGTGCTCAACTTTGAAGCCCCATTACCAATTCTTCCACAAAACATGCCATTCCTAGGTCCTCTACCTTCTCCCTTAATAAATGAGCAATTTTTCTCAGTTTCGTCTTTCTTTAGGGGAACATGTTAA 483 0.4182 MDHEKGSETTIVTGTRGYLAPEYMDTGKARKESDIFSFGVVLLEISCGKKAIHHQELKGEVSLVEWVWKLYGLRNITVAADPKLYGQFDAKELEWLLVVGLWCDNPDNTSRPSIKKVIKVLNFEAPLPILPQNMPFLGPLPSPLINEQFFSVSSFFRGTC 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01677 160 PANTHER - 1 159 - -
Tsu02g01677 160 SUPERFAMILY Protein kinase-like (PK-like) 7 146 IPR011009 -
Tsu02g01677 160 PANTHER LECTIN RECEPTOR KINASE 1 159 - -
Tsu02g01677 160 Gene3D Transferase(Phosphotransferase) domain 1 1 136 - -
Tsu02g01677 160 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01677 160 Pfam Protein kinase domain 5 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01677 Tsu-Chr2 14792504 14792986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01677 1 135 Receptor kinase-like Gene Family AT5G10530 53.623 2.21e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu02g01677 Pkinase 4.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01677 - - cam:101492002 265.774