Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01675 ATGGTCTTTGCAGCACCAAAAGCAATGCATGTCCAGttccataattattttttgttatctaTTTTCTTGCTCTTAAATTTGATTATTCCAAATGTATCCTCATTGAACTTTAACTTCAGTGGTTTTGATCCTAATGACAAAACCATAATCTATGAAGGATCAGCAAGTTCTGCATCATCGGCTATCGATCTTACTATAAACCAGCAGGGGAAGCTTATGAATGGAAGCATTGGTAGAGCCACATATTACCAGCCTATTCATTTGTGGGATAAAAGTACAAAAAATCTCACAGATTTCACATCCCATTTCACTTTTACCATAAATTCACAGAATAAAAGACAATATGGAGATGGTATGGCATTCTTTCTTGCCCCTTCTGGTTCAAAGATGCCTAATGCTACAAAAGGTCGTTCTATGGGTCTAACACTTGATGACCAAGCAACAAACTCATCTGAAACTAATCCATTTGTTGCTGTTGAGTTTGATATCTATAAGAATCCTTGGGATCCACCACATGAACATGCTGGAAtcgacatcaactcaatgataTCTGTTGCTAATGTGACATGGTTGGCTGATATCATAGAAGGTAAACTCAATGAGGCTTGGGTAAGTTACAATGCTAGTTCATTAAATCTAAGTGTTATATTCACTGGTTTTAACAACGTAACTTCTACCACTGTGAATCAACATCTATCTTCCATTGTTGATCTTAGACTTTATCTGCCAGAATTTGTTACTATTGGCTTCTCAGCTGCCACAGGAAATTCAACTGCTGTTCATACACTCAATTCGTGGGATTTTCGCTCAAATTTGGAAGGAGaagaagataaaaacaaaacaaactcaCAAGACCCAGTTGCAAGGTCTCCATCCTTCAACACAGCTCCCACTAAAATGAAAAAGGCTAAGACAGGACTAGCATTGGGATTGGGAATTGGTGGATTTGTTCTGATTGGTGTGTTCGGTTTTATTTCGGTTTGCTTGTGGAAGAAAGGATGTAAAGAGGAAGATGGTGAATTTGAAGAGTACATGGGTGAGGATTTTGGAAGAGGAGGACCCAAGAAGTATACATATGAAGAATTAGCACATGCAGCAGATAATTTCAATGATGAACATAAGCTAGGACAAGGAGGATTTGGAGGTGTTTATAGAGGTTTTCTCAAAGACATAAAATCTTATGTTGCTATTAAGAGGGTGTCAGAAGATTCTCATCAAGGGATAAAGGAGTTTGCATCAGAAGTAACAATTATTAGCAAATTAAGGCATAGAAATCTAGTGCAATTGATAGGTTGGTGTCATGAAAGAAAAAAGCTATTGCTTGTATATGAGTACATGCCAAATGGAAGTTTAGACATTCATCTTttcaaggaacaaagtttgtTGAAATGGGCTGTTAGATTTACAATAGCTAGAGGATTGGCTTCTGCATTGTCATATTTGCATGAAGAATGGGAACAATGTGTTATTCATAGAGACATAAAAACAAGCAACATAATGTTGGATTCAGAGTTCAATGCAAAACTTGGAGATTTTGGTTTAGCAAGGTTTGTGGATCATGCAAAAGGTGCACAAACTACAGCTTTAGCAGGGACTTTAGGATACATGGCTCCTGAATGTGCTACCGTAGGAAGGTTTAGTAAAGAAACAGATGTGTATAGTTTTGGAATTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCAATAAACCTTAAGGCTCAAGAAAACGAAATACACATTGTAGATTGGGTTTGGGGGCTATATGGAAGAGGGAAAATTCTTGAAGCAGTGGATCCAAGATTAAGTGGAGATTTTGAAGAGGAACAAATCAAGTGTTTAATGATTGTTGGTATTTGGTGTGCTCATCCTGATCCTAAGAATAGGCCTTCAATAAGACAAGCTATTCAAGtgcttaattttgaagctacaTTGCCTAATCTTCCATCAAGTATGCCTGTACCAACTTATCTTGAGGGTCCTTTGAACTCATTCACCATAAATGGTTCAGAGGAAGGTCAAAACACAAATATAGTAAACTTTATTAGTTCAAACACAAACTCATCTGGTGTCACTACTTCTGATGATGGTTCTCCTTCTGAGTCACTTGTGGATTCTAGTTCTAGATATAAATAA 2133 0.3563 MVFAAPKAMHVQFHNYFLLSIFLLLNLIIPNVSSLNFNFSGFDPNDKTIIYEGSASSASSAIDLTINQQGKLMNGSIGRATYYQPIHLWDKSTKNLTDFTSHFTFTINSQNKRQYGDGMAFFLAPSGSKMPNATKGRSMGLTLDDQATNSSETNPFVAVEFDIYKNPWDPPHEHAGIDINSMISVANVTWLADIIEGKLNEAWVSYNASSLNLSVIFTGFNNVTSTTVNQHLSSIVDLRLYLPEFVTIGFSAATGNSTAVHTLNSWDFRSNLEGEEDKNKTNSQDPVARSPSFNTAPTKMKKAKTGLALGLGIGGFVLIGVFGFISVCLWKKGCKEEDGEFEEYMGEDFGRGGPKKYTYEELAHAADNFNDEHKLGQGGFGGVYRGFLKDIKSYVAIKRVSEDSHQGIKEFASEVTIISKLRHRNLVQLIGWCHERKKLLLVYEYMPNGSLDIHLFKEQSLLKWAVRFTIARGLASALSYLHEEWEQCVIHRDIKTSNIMLDSEFNAKLGDFGLARFVDHAKGAQTTALAGTLGYMAPECATVGRFSKETDVYSFGIVALEIACGRKPINLKAQENEIHIVDWVWGLYGRGKILEAVDPRLSGDFEEEQIKCLMIVGIWCAHPDPKNRPSIRQAIQVLNFEATLPNLPSSMPVPTYLEGPLNSFTINGSEEGQNTNIVNFISSNTNSSGVTTSDDGSPSESLVDSSSRYK 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01675 710 CDD lectin_legume_LecRK_Arcelin_ConA 35 272 IPR001220 GO:0030246
Tsu02g01675 710 ProSitePatterns Legume lectins alpha-chain signature. 242 251 IPR000985 -
Tsu02g01675 710 MobiDBLite consensus disorder prediction 686 710 - -
Tsu02g01675 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Tsu02g01675 710 ProSitePatterns Protein kinases ATP-binding region signature. 375 398 IPR017441 GO:0005524
Tsu02g01675 710 Pfam Protein kinase domain 369 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01675 710 MobiDBLite consensus disorder prediction 274 297 - -
Tsu02g01675 710 ProSiteProfiles Protein kinase domain profile. 369 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01675 710 SUPERFAMILY Protein kinase-like (PK-like) 354 657 IPR011009 -
Tsu02g01675 710 Pfam Legume lectin domain 34 282 IPR001220 GO:0030246
Tsu02g01675 710 SMART serkin_6 369 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01675 710 PANTHER RECEPTOR LECTIN KINASE 19 699 - -
Tsu02g01675 710 CDD STKc_IRAK 375 639 - -
Tsu02g01675 710 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 274 IPR013320 -
Tsu02g01675 710 PANTHER - 19 699 - -
Tsu02g01675 710 Gene3D Phosphorylase Kinase; domain 1 354 445 - -
Tsu02g01675 710 Gene3D - 32 286 - -
Tsu02g01675 710 Gene3D Transferase(Phosphotransferase) domain 1 446 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01675 Tsu-Chr2 14787765 14789897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01675 27 656 Receptor kinase-like Gene Family AT5G10530 46.967 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu02g01675 Pkinase 1.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01675 - - mtr:MTR_4g093080 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01675 02 14787765 14789897 Tsu02g01675 02 14787765 14789897 ECH