Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01674 ATGGTCTTTGCAGCACCAAAAGCAATGCATGTCCAGttccataattattttttgttatctaTTTTCTTACTCTTAAATTTGATTATTCCAAATGTATCCCCATTGACCTTTAACTTCACTAGTTTTGATCCTAATGACAAAACCATAATCTATGAAGGATCAGCAAGTTCTGCATCATCGGCTATCGATCTTACTATAAACCAGCAGGGGAAGCCTATGAATGGAAGCATTGGTAGAGCTACATATTACAAACCTATCCATTTGTGGGATAAAACTACAAAAAATCTCACAGATTTCACATCCCATTTCACTTTTACCATAAATTCACAGAATAGAAGACATTATGGAGATGGTATGGCATTCTTTCTTGCCCCTTCTGGTTCAAAGATGCCTAATGCTACAAAAGGTCGTTCTATGGGTCTAACACTTGATGACCAAGCATTGAACTCAACTGAAACTAATCCATTTGTTGCGGTTGAGTTTGATATCTATCAGAATTATTTTGATCCACCACATGAACATGCCGGAAtcgacatcaactcaatgataTCTGCTGCTAATGTGACATGGTTGGCTGATACCAAAGAAGGTAAACTCAATGAGGCTTGGGTAAGTTACAATGCTAGTTCATTAAATCTAAGTGTTTTATTCACTGGTTATAACAACATAACTTCTACCACTGTGGATCAACGTCTATCTTCCATTGTTGATCTTAGACTTTATCTGCCAGAATTTGTTACTATTGGCTTCTCAGCTGCCACAGGGAGTGCAATTGCTGTTCATACTCTCAATTCGTGGAAATTTCACTCAAATTTGGAAGGTGAAGAAgataacaacaaaacaaactcaCAAGACCCAGTTGCAAGGTCTCCATCCTTCAACACAGCTCccactaaaaagaaaaaggccAAGACAAGACTAGCATTGGAACTCGGAGTTGGTGGATTTGTATTGATTGGTGTGTTAGGTTTTATTTCGGTTTGCCTGTGGAATAAGTGGAAGAgaagaagtgaagaaaaagaTGGTGAATTTGAAGAGTGCATGGGTGAGGATTTTGGAAGAGGAGGACCCAAGAAGTATACATATGAAGAATTAGCACATGCAGCTGATAATTTCAAAGATGAACATAAGCTAGGACAAGGAGGATTTGGAGGTGTTTATAGAGGTTTTCTCAAAGACATAAAATCTTATGTTGCTATTAAGAGGGTGTCAGAAGATTCTCATCAAGGGATAAAGGAGTTTGCATCAGAAGTAACAATTATTAGCAAGTTAAGGCATAGAAATCTAGTGCAATTGATGGGTTGGTGTCATGAAAGAAAAAAGCTCTTGCTTGTATATGAGTACATGCCAAATGGAAGTTTAGACATTCATCTTttcaaggaacaaagtttgtTGAAATGGGCTGTTAGATATACAATAGCTAGAGGATTGGCTTCTGCATTGTCATATTTGCATGAAGAATGGGAACAATGCGTTATACATAGAGACATAAAAACAAGCAACATAATGTTGGATTCAGAGTTCAATGCAAAACTAGGAGATTTTGGTTTAGCAAGGTTTGTAGATCATGCAAAAGGTGCACAAACTACAGCTTTAGCAGGGACTTTGGGATACATGGCTCCTGAATGTTCTACTACTGGAAGGGCTAGTAAAGAAACAGatgtatatagttttggaattGTTGCTTTAGAGATAGCCTGCGGAAGAAAACCTATCATTAATGctcaagaaaatgaaagaaatattGTGGATTGGGTTTGGGGGCTATTTGGAAGTGGGAGAGTTCTTGAAGCAGTAGATCCAAGACTAGGTGAAGATTTTGATGAGGGACAAATTAAGTGCTTAATGACTGTTGGTCTTTGGTGTACTCATCCTGATCCGAATAATAGGCCTTCAATAAGACAAGCTACTCACGtgcttaattttgaagctacaTTGCCTAATCTTCCATCAAGTATGCCTGTGCCAACATATCTTGAGGGTTCTTAG 1989 0.3519 MVFAAPKAMHVQFHNYFLLSIFLLLNLIIPNVSPLTFNFTSFDPNDKTIIYEGSASSASSAIDLTINQQGKPMNGSIGRATYYKPIHLWDKTTKNLTDFTSHFTFTINSQNRRHYGDGMAFFLAPSGSKMPNATKGRSMGLTLDDQALNSTETNPFVAVEFDIYQNYFDPPHEHAGIDINSMISAANVTWLADTKEGKLNEAWVSYNASSLNLSVLFTGYNNITSTTVDQRLSSIVDLRLYLPEFVTIGFSAATGSAIAVHTLNSWKFHSNLEGEEDNNKTNSQDPVARSPSFNTAPTKKKKAKTRLALELGVGGFVLIGVLGFISVCLWNKWKRRSEEKDGEFEECMGEDFGRGGPKKYTYEELAHAADNFKDEHKLGQGGFGGVYRGFLKDIKSYVAIKRVSEDSHQGIKEFASEVTIISKLRHRNLVQLMGWCHERKKLLLVYEYMPNGSLDIHLFKEQSLLKWAVRYTIARGLASALSYLHEEWEQCVIHRDIKTSNIMLDSEFNAKLGDFGLARFVDHAKGAQTTALAGTLGYMAPECSTTGRASKETDVYSFGIVALEIACGRKPIINAQENERNIVDWVWGLFGSGRVLEAVDPRLGEDFDEGQIKCLMTVGLWCTHPDPNNRPSIRQATHVLNFEATLPNLPSSMPVPTYLEGS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01674 662 CDD lectin_legume_LecRK_Arcelin_ConA 35 272 IPR001220 GO:0030246
Tsu02g01674 662 ProSitePatterns Legume lectins alpha-chain signature. 242 251 IPR000985 -
Tsu02g01674 662 ProSiteProfiles Protein kinase domain profile. 372 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01674 662 MobiDBLite consensus disorder prediction 274 299 - -
Tsu02g01674 662 Pfam Legume lectin domain 35 282 IPR001220 GO:0030246
Tsu02g01674 662 CDD STKc_IRAK 378 641 - -
Tsu02g01674 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Tsu02g01674 662 Gene3D Transferase(Phosphotransferase) domain 1 449 661 - -
Tsu02g01674 662 Gene3D - 33 285 - -
Tsu02g01674 662 Gene3D Phosphorylase Kinase; domain 1 357 448 - -
Tsu02g01674 662 SUPERFAMILY Protein kinase-like (PK-like) 357 652 IPR011009 -
Tsu02g01674 662 SMART serkin_6 372 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01674 662 ProSitePatterns Protein kinases ATP-binding region signature. 378 401 IPR017441 GO:0005524
Tsu02g01674 662 MobiDBLite consensus disorder prediction 283 298 - -
Tsu02g01674 662 Pfam Protein kinase domain 372 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01674 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 277 IPR013320 -
Tsu02g01674 662 PANTHER - 19 661 - -
Tsu02g01674 662 PANTHER RECEPTOR LECTIN KINASE 19 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01674 Tsu-Chr2 14777351 14779339 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01674 15 658 Receptor kinase-like Gene Family AT5G10530 46.201 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu02g01674 Pkinase 6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01674 - - mtr:MTR_4g093080 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01674 02 14777351 14779339 Tsu02g01674 02 14777351 14779339 ECH