Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01673 ATGTTATTATCTATTTTCTTACTCTTAAGCTTGATTATTCCATATACATCTTCATTGACTTTTAATTTCACTAGTTTTGATCCTAATGACAGAAGCATAATCTATGAAGGATCGGCGAATCCAGCATCATCAGCTATACAACTTACAATAAATCAACAAGATTCACAGAATAGACAAAAATATGGAGATGGTATAGCATTCTTTCTCATCCCTTCAGGTACAAAGAAGCCTAATGCAACAAAAGGTGGTTCTATGGGTTTAACACTTGATGATCAAGCATTGAACTCAACTGAAACTAATCCATTTGTTGCTGTTGAGTTTGATATCTATCAGAATCCTTGGGATCCACCACTTGAACATGCCGGAATCGATATCAACTCAATGATATCTGTTGCTAATGTGACATGGTTGGCTGATATCAAAGAAGGAAATGCAACTGCTATTCATAGTATCTCTTCATGGGATTTTAGCTCAACTTTAGAATCACAACaagataacaaaaaaacaatcatAGAAGATCCTAATATAGCTCCTAGTTCTAAGAAGAAAAAGTCCAAGGCAGGACTAGCAGCAGGATTGGGAATTGGTGGATTTGTTTTGATTGGTGTGTTtggttttatttcattttacttGTGGAAGAAGTGGAAGAAAGTaaaagaagaggaagatgatgattttgaagAGTACATGGGTGAGGATTTTGGAAGAGGAGGACCTAAGAAGTATACATATGCAGAATTAGCACATGCGGCTAATAATTTCAAAGATGAACATAAGCTAGGACAAGGAGGTTTTGGAGGTGTTTATAGAGGTTTTCTTAAAGACACAAAATCTTATGTTGCTATTAAGAGGGTGTCAGAAGATTCTCATCAAGGGATAAAGGAGTTTGCATCAGAAGTAACGATTATTAGCAAGTTAAGGCACAGAAATCTAGTGCAATTGATAGGTTGGTGTCATGAAAGAAAAAAGCTATTGCTTGTATATGAGTACATGCCAAATGGAAGTTTAGACATTCatcttttcaaaaaacaaagtttgttGAAATGGGCTGTTAGATATACAATTGCTAGAGGCTTGGCTTCTGCATTGTTATATTTGCATGAAGAATGGGAACAATGTGTTGTACATAGAGACATAAAAGCAAGCAATATAATGTTGGATTCAGAGTTTAATGCAAAACTTGGAGATTTTGGTTTAGCAAGGTTTGTGGACCATGCAAAAAGTGCACAAACTACAGCTTTAGCAGGGACTTTGGGATACATGGCTCCTGAATGTTCTACTACTGGAAGGGCTAGTAAAGAAACAGATGTGTATAGTTTTGGAATTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCAATAAACCTTAAGGCTCAAGAAAACGAAATACACATTGTAGATTGGGTTTGGGGGCTATATGGAAGAGGGAAAATTCTTGAAGCAGTGGATCCAAGATTAAGTGGAGATTTTGAAGAGGAACAAATCAAGTGTTTAATGATTGTTGGTATTTGGTGTGCTCATCCTGATCCTAAGAATAGGCCTTCAATAAGACAAGCTATTCAAGTGCTTAATTTTGAAGCTCCATTGCCTAATCTTCCATCAAGTATGCCTGTACCAACTTATCTTGAGGGTCCTTTGAACTCATTCACTGCTCCATTTAGCATAAGTGGTTCTGAGAAAAGTCAAAGCCAGAATATAATAAGCTTTAGTTCAACTTCAAACACAAACTCATCTGGGTTTACTAGTACTACTACAACAACTTCTGATGATGTTTCTCCTTCTATGTCGCTTCTGTATTctagaagaaattaa 1812 0.3466 MLLSIFLLLSLIIPYTSSLTFNFTSFDPNDRSIIYEGSANPASSAIQLTINQQDSQNRQKYGDGIAFFLIPSGTKKPNATKGGSMGLTLDDQALNSTETNPFVAVEFDIYQNPWDPPLEHAGIDINSMISVANVTWLADIKEGNATAIHSISSWDFSSTLESQQDNKKTIIEDPNIAPSSKKKKSKAGLAAGLGIGGFVLIGVFGFISFYLWKKWKKVKEEEDDDFEEYMGEDFGRGGPKKYTYAELAHAANNFKDEHKLGQGGFGGVYRGFLKDTKSYVAIKRVSEDSHQGIKEFASEVTIISKLRHRNLVQLIGWCHERKKLLLVYEYMPNGSLDIHLFKKQSLLKWAVRYTIARGLASALLYLHEEWEQCVVHRDIKASNIMLDSEFNAKLGDFGLARFVDHAKSAQTTALAGTLGYMAPECSTTGRASKETDVYSFGIVALEIACGRKPINLKAQENEIHIVDWVWGLYGRGKILEAVDPRLSGDFEEEQIKCLMIVGIWCAHPDPKNRPSIRQAIQVLNFEAPLPNLPSSMPVPTYLEGPLNSFTAPFSISGSEKSQSQNIISFSSTSNTNSSGFTSTTTTTSDDVSPSMSLLYSRRN 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01673 603 Gene3D - 16 148 - -
Tsu02g01673 603 PANTHER RECEPTOR LECTIN KINASE 7 61 - -
Tsu02g01673 603 PANTHER RECEPTOR LECTIN KINASE 56 144 - -
Tsu02g01673 603 PANTHER RECEPTOR LECTIN KINASE 143 598 - -
Tsu02g01673 603 ProSiteProfiles Protein kinase domain profile. 254 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01673 603 PANTHER - 56 144 - -
Tsu02g01673 603 SMART serkin_6 254 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01673 603 MobiDBLite consensus disorder prediction 569 603 - -
Tsu02g01673 603 PANTHER - 7 61 - -
Tsu02g01673 603 PANTHER - 143 598 - -
Tsu02g01673 603 Gene3D Phosphorylase Kinase; domain 1 239 330 - -
Tsu02g01673 603 CDD STKc_IRAK 260 524 - -
Tsu02g01673 603 Pfam Legume lectin domain 56 144 IPR001220 GO:0030246
Tsu02g01673 603 SUPERFAMILY Protein kinase-like (PK-like) 239 543 IPR011009 -
Tsu02g01673 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Tsu02g01673 603 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 168 IPR013320 -
Tsu02g01673 603 ProSitePatterns Protein kinases ATP-binding region signature. 260 283 IPR017441 GO:0005524
Tsu02g01673 603 Pfam Protein kinase domain 254 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01673 603 Gene3D Transferase(Phosphotransferase) domain 1 331 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01673 Tsu-Chr2 14772448 14774547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01673 1 541 Receptor kinase-like Gene Family AT5G10530 43.701 1.17e-166 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu02g01673 Pkinase 2.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01673 - - mtr:MTR_4g093080 840.491