Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01672 ATGGCAACATCTTGCACCTTTGAGAAAatctatcttctttctttctttcatttaaCATTATCACTCTTGTTTCTTGTAACATCTCATGCAGCTCCATTATCATTCAACTATGATCAACTTGGTAGTGACAAAAcaaaattcttcaatttttcagGTACTGATGTCTATCAAGACAACCAAGTACTCCAACTCACAAAGTATGAGAAAGACAGTCTAGGTAGAGTCACATATTCAAAACTGTTTCATCTTTGGGACATAAACACAAATCAAGTTACAGATTTCACTACTCGTTTTTCATTTACTATTAACACCCCCAACAAAACCAATCATGGAGATGGCATCACTTTCTATTTGGCACATCCAAATTTTCCACTACCTGTTCCAAGAGATGGAAGTGGTATTGGTCTTGTAAGCCCTGTTAAATTGAATAATATAAATTTCACAAAAGAAAATCCATTTGTAGCTGTGGAATTTGATACTTTTGTTAATGAGTTGGATCCTAAATATGAACATGTTGGGATTGATGTTAATTCTATAAGCACTTCTTACACTACACAATGGTTCACTAGCATGGATGATGATGCTGAAGTAAGTTATAATTCTAGTTCAAACAATTTATCTGTCACCTTCACAGGTTATCAAGATAACAAAATGATCCAACAACATTTGTCGAGTGTTGTCGATTTGAGAGAAGTACTACCTGATTGGGTTGAATTTGGATTCACTTCAGCAACAGGGTTGTTATGGGGGGAGTATCATACTCTTAACTCATGGTCCTTCAACTCAAGTTTAGATTTTGAAGCAGAAAAGGATGGAACAAAAAAAGGACTTGTTATAGGACTTAGTGTTGGTggtgttgttgttttgatttgtgTTATCGGGTTGGTTTGTTTTGTGAAATGGAAGCTCAGGAATAAATATACGAACGATGTTTTGCATTCTGATCTTGCAATGGATAGTGATTTTGAAAGAAGCTCTCTACCTAAGAAgtttacctttgaagaacttgCTAGAGCAACTAACAACTTTGCAAAGGAACACAAAATCGGAGAAGGAGGTTTTGGAGGAGTCTATAAGGGATTTATAAAAGACTTGAAAACTCATGTTGCTATAAAGAAAGTTTCTAAGGAATCAAATCAAGGAGTTAAGGAGTATGCATCAGAAGTTAAAGTCATTAGTCAATTACGGCATAAGAATTTGGTTCAACTTTTCGGATGGTGTCATAAACAAAATGATCTACTTTTAGTTTATGAGTTTGTGCAAAATGGAAGCTTAGATTCTTACCTTTTCAAAGGAAAAGGAACATATGGTTATTTATCACCAGAAGCTGCTACTAGAGGTAAAGCTAGTAGAGAATCTGATGTATATAGTTTTGGAGTTGTTGCTTTGGAAATAGCTTGTGGTAGAAAAGCAATTGAACCAAGTCTTGGTGAAGATAATATTTACTTGGTAGATTGGGTTTTGGAACTTTATGGTAAAGGTGAAGTTCTTAAAGCATGTGATTCAAGATTATATGGTGAATTCAATGAAAAGGAAATTGAGAGATTAATGATAATTGGACTTTGGTGTACTCATATGGATCATGTTCAAAGACCTATAATTAGGCAAGTTGTTCAAGTGCTTAATTTTGATGCTCCATTGCCTACTCTTCCATTACAGATGAATGGTTCTACCTATAATAAATCATTATATTCTGTGTCCTCTAAATCTAAGACTTCAACTTCAAGCAATAGAACCTTCACAGGGACAGGGTCCTCCTCACAATCAAGCACTGCCTTTGAAGTCATTTCTCCATCAGCTGCACTTCTAAATACATTCTAG 1821 0.335 MATSCTFEKIYLLSFFHLTLSLLFLVTSHAAPLSFNYDQLGSDKTKFFNFSGTDVYQDNQVLQLTKYEKDSLGRVTYSKLFHLWDINTNQVTDFTTRFSFTINTPNKTNHGDGITFYLAHPNFPLPVPRDGSGIGLVSPVKLNNINFTKENPFVAVEFDTFVNELDPKYEHVGIDVNSISTSYTTQWFTSMDDDAEVSYNSSSNNLSVTFTGYQDNKMIQQHLSSVVDLREVLPDWVEFGFTSATGLLWGEYHTLNSWSFNSSLDFEAEKDGTKKGLVIGLSVGGVVVLICVIGLVCFVKWKLRNKYTNDVLHSDLAMDSDFERSSLPKKFTFEELARATNNFAKEHKIGEGGFGGVYKGFIKDLKTHVAIKKVSKESNQGVKEYASEVKVISQLRHKNLVQLFGWCHKQNDLLLVYEFVQNGSLDSYLFKGKGTYGYLSPEAATRGKASRESDVYSFGVVALEIACGRKAIEPSLGEDNIYLVDWVLELYGKGEVLKACDSRLYGEFNEKEIERLMIIGLWCTHMDHVQRPIIRQVVQVLNFDAPLPTLPLQMNGSTYNKSLYSVSSKSKTSTSSNRTFTGTGSSSQSSTAFEVISPSAALLNTF 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01672 606 ProSiteProfiles Protein kinase domain profile. 343 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01672 606 PANTHER - 434 603 - -
Tsu02g01672 606 SUPERFAMILY Protein kinase-like (PK-like) 327 561 IPR011009 -
Tsu02g01672 606 CDD lectin_legume_LecRK_Arcelin_ConA 33 264 IPR001220 GO:0030246
Tsu02g01672 606 Gene3D Transferase(Phosphotransferase) domain 1 430 547 - -
Tsu02g01672 606 Gene3D - 31 267 - -
Tsu02g01672 606 Pfam Protein tyrosine and serine/threonine kinase 435 539 IPR001245 GO:0004672|GO:0006468
Tsu02g01672 606 Pfam Protein tyrosine and serine/threonine kinase 346 431 IPR001245 GO:0004672|GO:0006468
Tsu02g01672 606 PANTHER LECTIN RECEPTOR KINASE 434 603 - -
Tsu02g01672 606 ProSitePatterns Legume lectins alpha-chain signature. 233 242 IPR000985 -
Tsu02g01672 606 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Tsu02g01672 606 ProSitePatterns Protein kinases ATP-binding region signature. 349 373 IPR017441 GO:0005524
Tsu02g01672 606 ProSitePatterns Legume lectins beta-chain signature. 154 160 IPR019825 -
Tsu02g01672 606 PANTHER LECTIN RECEPTOR KINASE 17 431 - -
Tsu02g01672 606 PANTHER - 17 431 - -
Tsu02g01672 606 Pfam Legume lectin domain 33 272 IPR001220 GO:0030246
Tsu02g01672 606 MobiDBLite consensus disorder prediction 569 589 - -
Tsu02g01672 606 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 264 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01672 Tsu-Chr2 14769620 14771653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01672 434 560 Receptor kinase-like Gene Family AT5G10530 53.077 1.20e-35 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu02g01672 Lectin_legB 3.4e-57 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01672 - - mtr:MTR_4g093140 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01672 02 14769620 14771653 Tsu02g01672 02 14769620 14771653 ECH