Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01661 ATGGTTCCTATGTTTTATTATGCAAGAGgaacaattttgattttcatcCTCGTCCTTGTTGCACATGCTCACCTTGTGTCTTTTGATTACCCTATGTTTAGTCACAATTGTGAAGAGCCGCTAGAATTTGATGGAGATGCCACTATTGAAGATTTTGACTACACTACTCAACTCACTGGGTACCCTGGTGACCCAGTTAAGGCTTCTGATGTTGGTCGAGTCGCAAATCCCAAACTTGATGACTTTACAAAGTTTTCAAATTACAGTGAAATTGCTTTAGACACAACTTTCTGCCTTGCGATGTCAGGTTTCCCAAAAGGAAATCATATAGAAGATAGATTGTTTATTcttgtgcctgcaagtgaagtTGCTTTAAACTCAACTCAGTATTCATCTGAGTCTGTGGATTTCCACACGTTAAAAAATGATAATCTAAGTGTTTCTAAATACagctcaaaaaataataatctaaaTGTTTCTGCCACTGGATACAGATTGAGTGAAGGGCGAGACCAACAGAACTTTTCACACACCATTGATCTAAAAGAGCATCTAGCAGAGTATGTTGGCATATCAGCTTCAACAGGAAAAGTAGATAAGAAACATATGCTGCGGTTTTGGTCTTTTAGTACAACCCAAGCAAATTATGAAGTTGATCATGAGAATAAAAGAAACTTAATCAAGATTAAATTGTGGGAGGGATTGGCAGTTGGTTGTGTATGTTTGACTTTGGGTTTATTAGCaatgttaataattttattatggaAGAAGAATAAAGGAAAAGAAGAAGTATCTGCTACCTCAGAAACCCTTTCTGATCAGAATATGGATGAAGAATTCCAAATGGGTTCTGGACCTAAAAAGATTAGTTATCAGGAATTATTGAATGCAACAAACAACTTTGAAGAGACACTGAAGCTTGGCCAAGGTGGTTTTGGTGGTGTTTATAAAGGTTATTTTAAAGACACAAACACAGTTGCAGCTATAAAGAGGAGGAAATCAGCAGATTCGTGGCAGGGTATAAAGCAATACTCAGCGGAAGTGAAGATCATTAGCCAATTGAGACATAGAAATTTGGTGAAACTCAATGGTTGGTGCCACAAGAAGAAAGAACTTATCCTAATATACGAATACATGCCTAATGGCAGCTTAGATTTTCATCTTTTTCGTGGAGGAAGCATCTTGTCGTGGCACTTGAGGTACAATATAGCTCTTGGGTTAGCCTCAGCATTGCTTTATTTGCAGGAAGAGTTGGAAAAATGTGTGATTCATAGGGACATAAAATCAAGCAACATAATGTTGGACTCCGACTTCAATACTAAGCTTGGGGATTTTGGTCTAGCTAGGCTGATGGATCATGAGAAAGAGTCAGAAACCACAATTGTGGCCGGAACCAGGGGTTACCTAGCTCCAGAATACATGGACACAGGCAAGGCTAGAAAGGAATCTGATATATTCAGTTTCGGGGTTGTTTTGTTAGAGATAGCCTGTGGAAAAAAAGCCATACACTACCAAGAATTGAAGGGTGAAGTATCACTGGTCGAGTGGGTTTGGGAGCTATACCGATTGAGAAATATCATTGGAGCAGCAGATCCAAAGCTATATGGGCAATTTGATTTGAAGGAATTGGAATGTTTGCTAGTAGTTGGACTTTGGTGTGCTAATCCAAATAACACATCAAGACCATCTATAAAGAAAGTGATTAAAGTGCTCAACTTTGAAGCCCCATTACCAACTCTTCCTCAAAACATGCCATTCCTAGGTCCTCTGTCTTCTCCCATAATAAATGAGCAATTTTTCTTAGTTCCCTCTTTCTTTTAG 1821 0.3718 MVPMFYYARGTILIFILVLVAHAHLVSFDYPMFSHNCEEPLEFDGDATIEDFDYTTQLTGYPGDPVKASDVGRVANPKLDDFTKFSNYSEIALDTTFCLAMSGFPKGNHIEDRLFILVPASEVALNSTQYSSESVDFHTLKNDNLSVSKYSSKNNNLNVSATGYRLSEGRDQQNFSHTIDLKEHLAEYVGISASTGKVDKKHMLRFWSFSTTQANYEVDHENKRNLIKIKLWEGLAVGCVCLTLGLLAMLIILLWKKNKGKEEVSATSETLSDQNMDEEFQMGSGPKKISYQELLNATNNFEETLKLGQGGFGGVYKGYFKDTNTVAAIKRRKSADSWQGIKQYSAEVKIISQLRHRNLVKLNGWCHKKKELILIYEYMPNGSLDFHLFRGGSILSWHLRYNIALGLASALLYLQEELEKCVIHRDIKSSNIMLDSDFNTKLGDFGLARLMDHEKESETTIVAGTRGYLAPEYMDTGKARKESDIFSFGVVLLEIACGKKAIHYQELKGEVSLVEWVWELYRLRNIIGAADPKLYGQFDLKELECLLVVGLWCANPNNTSRPSIKKVIKVLNFEAPLPTLPQNMPFLGPLSSPIINEQFFLVPSFF 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01661 606 ProSiteProfiles Protein kinase domain profile. 301 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01661 606 SUPERFAMILY Protein kinase-like (PK-like) 279 573 IPR011009 -
Tsu02g01661 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Tsu02g01661 606 Gene3D Transferase(Phosphotransferase) domain 1 379 587 - -
Tsu02g01661 606 Pfam Protein kinase domain 302 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01661 606 SMART serkin_6 301 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01661 606 Gene3D Phosphorylase Kinase; domain 1 286 378 - -
Tsu02g01661 606 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 220 IPR013320 -
Tsu02g01661 606 Gene3D - 25 212 - -
Tsu02g01661 606 CDD STKc_IRAK 307 572 - -
Tsu02g01661 606 Pfam Legume lectin domain 127 221 IPR001220 GO:0030246
Tsu02g01661 606 PANTHER - 149 606 - -
Tsu02g01661 606 PANTHER - 15 142 - -
Tsu02g01661 606 ProSitePatterns Protein kinases ATP-binding region signature. 307 330 IPR017441 GO:0005524
Tsu02g01661 606 PANTHER LECTIN RECEPTOR KINASE 149 606 - -
Tsu02g01661 606 PANTHER LECTIN RECEPTOR KINASE 15 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01661 Tsu-Chr2 14615976 14617796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01661 150 585 Receptor kinase-like Gene Family AT5G10530 48.874 1.66e-135 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu02g01661 Pkinase 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01661 - - cam:101492002 797.734