Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01632 ATGGAAGGTGGAAACAGAGCCGAAGCTGAACGCTGGCTTTACACCGCAAACAAACTCCTTAGCGCACGTGATCTACACGGTGCACGTTCCTTCGCGATCCGTGCTCGTGAATCCGACCCAACTTTCGACGCATCTGAGCTTTTACTTGCTGTCATCGACACTCTCCTCGCCGGTGAATCTCGAATCAACGACCACCACACTGATTGGTATGGAATCCTTCAAATCCTTCGTTACACAACAAATATCGACCATATCGCTAATCAGTATCGTCGTCTCGCTCTTCTCCTTGACCCTAATCGGAACCCTTTCGCTTTCTCCGGTCACGCTTTTTCCCTAGTTCACGATGCTTGGTCTGTTTTATCTAATCCTGCTAAGAAAGCTATGTACGATAGTGATCTAAGATTGCACACTACTCCACCGGTTCCGCCGCAAGTTCAGCCTCAGGTTCAGCCGCAGCAATCGGCACCTCAGTATCAACAACATCAGACGCATAATCCTACACCGAAGAAAAACCCTAGATCGAGGGAGGGTGTTGCTGAGCCGATTCGGCAGAATCGGAACCCTAATGAGTCTGCTGAACCGACTCGGCAGACACGGACAGCGACTGCTGCTGAAACGGATGGTAAGATTAGTTTCTGGACTTTGTGCCCTTACTGTTACGTTTATTATGAGTATCCCAAGGTGTATGAAGAGTGTACTTTACGGTGTCAGAGTTGTAGGAGAGGGTTTCATGCGGTGGTGATACGTTCGCCGCCGTTGAATGAGATAGATTCTTCGTTTTGTACTTGGGGATTTTTTCCATTAGGGTTTTCTGGTGATTCTAAAGATGTGAATGGGGCTTCTTCTAATTGGAACCCTATTGCACCTTTATTTCCATCTTCCATGAAAGGATCATCAACTAGGAAAAAGAATTGGGTTTACTATGATGAAGAGCAAACTGCGGCGTTTATTGATATTTCTGATCCGAGTGATGATGATTCTGATGATGGGGATTGGAGGGGTGGTATTGGTAAGAGGAAAGGAGTGAAGAGGTCAGGGGTTAGTACTAGCAAAAAGGTTAGGAAAGATTTTGGTAATGCTGGTGGTAGGGAAGCTGTGGAGAGACCTAGGAGGAGTGCTGTTGGTGCTGCTGCAGGGAATGGGAATGAGAAGCATGTTGGGGCTGTTGATGCTGCTGGCGTGAAGGCAGATACTAATAGTAGTAAGAAAGCTGTACCGAGTGGTTCTAGGAGGAGGGGCGCCGGAAATTTGGATTTGAATGTAGAGTTCAGTAATGATGTGGAGGAGCCTTCCCGTGTAGTGCGTGCTCGTGAAGGGAATGCAACTGGCAATGCGGAGGATAATATTGAAGGGATTGGATTTTTTGAAGGCCTTGATGAGTTCCTCAGTAGCTTGCCCATTCTCAATGTGGTGGGAGATGATAAGGTGACCCCCATCTGCTTGTGCTTCTGTTTCCAAATTTTTAGTGGCCGAGTAAAGATTTTTGAATTTTACAGTAGaataaaaaaaaatgacaaaacacCATTGTTGTCTTCTCCAAAGCTTCAAAGCCTCAGACGCATAACCCTACCCCGAGGAAAAACCCTAGATCGAGGAAGGCGTGACTGA 1608 0.4639 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDASELLLAVIDTLLAGESRINDHHTDWYGILQILRYTTNIDHIANQYRRLALLLDPNRNPFAFSGHAFSLVHDAWSVLSNPAKKAMYDSDLRLHTTPPVPPQVQPQVQPQQSAPQYQQHQTHNPTPKKNPRSREGVAEPIRQNRNPNESAEPTRQTRTATAAETDGKISFWTLCPYCYVYYEYPKVYEECTLRCQSCRRGFHAVVIRSPPLNEIDSSFCTWGFFPLGFSGDSKDVNGASSNWNPIAPLFPSSMKGSSTRKKNWVYYDEEQTAAFIDISDPSDDDSDDGDWRGGIGKRKGVKRSGVSTSKKVRKDFGNAGGREAVERPRRSAVGAAAGNGNEKHVGAVDAAGVKADTNSSKKAVPSGSRRRGAGNLDLNVEFSNDVEEPSRVVRAREGNATGNAEDNIEGIGFFEGLDEFLSSLPILNVVGDDKVTPICLCFCFQIFSGRVKIFEFYSRIKKNDKTPLLSSPKLQSLRRITLPRGKTLDRGRRD 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01632 535 MobiDBLite consensus disorder prediction 150 167 - -
Tsu02g01632 535 Gene3D DnaJ domain 57 140 IPR036869 -
Tsu02g01632 535 MobiDBLite consensus disorder prediction 184 204 - -
Tsu02g01632 535 Pfam DnaJ domain 68 130 IPR001623 -
Tsu02g01632 535 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 476 - -
Tsu02g01632 535 MobiDBLite consensus disorder prediction 319 416 - -
Tsu02g01632 535 CDD DnaJ 68 122 IPR001623 -
Tsu02g01632 535 MobiDBLite consensus disorder prediction 356 370 - -
Tsu02g01632 535 MobiDBLite consensus disorder prediction 134 204 - -
Tsu02g01632 535 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Tsu02g01632 535 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Tsu02g01632 535 SUPERFAMILY Chaperone J-domain 64 133 IPR036869 -
Tsu02g01632 535 SMART dnaj_3 67 125 IPR001623 -
Tsu02g01632 535 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01632 Tsu-Chr2 14375192 14380816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01632 8 476 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.273 6.36e-102 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01632 - - cam:101509006 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01632 02 14375192 14380816 Tsu08g04280 08 60756339 60758192 PCT