Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01621 ATGTTTGACAGAAACGCAGAGCCTATTAAGTGGTTGGAGAAGGCATATACCTTATTTCTCAGTAGAGTTTCTGAAATATGTAATGCTGCTTCAAGCCAGAAGGCTGATTATAAAGAATCTGCTACAATGGAAACTGATGGCATTAATCCATGGGACACCTCTACTTTGAATGACCTTTTGAAGAAGATAAATCCTTTAATTGTGAAATTTGACGGGTATCGTTCCAGCACTAAATCTTATGCAGGAAAAGTGGCCTTATCCACTTTGAAGAATGCATCAAGGAATAAAGTTATAGATATAGGTGGAATGAAGTACCATATAAAGGGTTGTGCTGGACAGGGTGGTTTTGCTCAAGTATACAAGGCAAATGTCAATAGTGACCCTGATGATGTTGTGGCAATAAAGATACAAAAGCCAGCTTTTCCTTGGGAATTTTACATGTATCGTCAGCTTGATCTGCGCATCTCTGGCAGAGAAAGGTCAAGCTATGGTTTCGCTCATAGAATTCATCTCTATTCTGACTGTAGCATACTCATCTGTGACTATTTAGCTAATGGGACACTACAGGATGTAATCAACTCATATTTGGTCATAGGAAAATCCATGGAAGAAGTATTGTGTGTTTATTACACAACAGAAATGTTGCACATGATTGAAACTTTGCATAATGTTGGCTTGATTCACGGTGATTTCAAGCCTGATAATCTGCTTGTACGCTATTCTAGGGGTAACCTCACAGAAGATGGGTTCTTAGACCGTAGCGGTTCTTGGGGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATCTTCATCTCTTTCCAGATCAGACAATATTTAAGGGAGATTGTAGAACTTCTGGTTTTCGATGCATTGAGATGCAGGAGGATAAGCCATGGAAATTTCAGGTAGATGCGTATGGCCTTTGCGGTGTTGTCCATACGATGCTGCATAATTGCTATATGGAAACCGTTAAGAAAGAATCATCTGATGGGGGCTCTGTATACCTTCCCAAACTACCCTTTAAACGTTACTGGAAAGCTGATCTCTGGAAGACTTTCTTCACTAAGATGCTAAATAACTATCCCTGCCATGATGATCGGAAGTTGCTGCAGGAATTGAAGAAGTCCTTCCAGGACTATATTGTCTCTGATCCTCAACGTATAAAGAAACTCAAGGAGTTACTTGCAAAGCAAAGGGTTTCTCTGTGTTCTGCTTAG 1227 0.4042 MFDRNAEPIKWLEKAYTLFLSRVSEICNAASSQKADYKESATMETDGINPWDTSTLNDLLKKINPLIVKFDGYRSSTKSYAGKVALSTLKNASRNKVIDIGGMKYHIKGCAGQGGFAQVYKANVNSDPDDVVAIKIQKPAFPWEFYMYRQLDLRISGRERSSYGFAHRIHLYSDCSILICDYLANGTLQDVINSYLVIGKSMEEVLCVYYTTEMLHMIETLHNVGLIHGDFKPDNLLVRYSRGNLTEDGFLDRSGSWGDQGLCLVDWGRGIDLHLFPDQTIFKGDCRTSGFRCIEMQEDKPWKFQVDAYGLCGVVHTMLHNCYMETVKKESSDGGSVYLPKLPFKRYWKADLWKTFFTKMLNNYPCHDDRKLLQELKKSFQDYIVSDPQRIKKLKELLAKQRVSLCSA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01621 408 Pfam Protein kinase domain 105 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01621 408 ProSiteProfiles Protein kinase domain profile. 105 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01621 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Tsu02g01621 408 PANTHER BUB1 KINASE, ISOFORM A-RELATED 29 407 - -
Tsu02g01621 408 Gene3D Transferase(Phosphotransferase) domain 1 103 405 - -
Tsu02g01621 408 SUPERFAMILY Protein kinase-like (PK-like) 104 382 IPR011009 -
Tsu02g01621 408 SMART serkin_6 105 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01621 408 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 29 407 IPR015661 GO:0007094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01621 Tsu-Chr2 14304642 14309344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01621 99 238 MAP Kinase Kinase Kinase Kinase AT3G15220 26.712 6.89e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Tsu02g01621 Pkinase 1.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01621 K02178 - gmx:100802272 709.523