Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01619 ATGGCTTCAAATTCATCTTGTCATTCCTTAACCACTTGTGTTTTATTCCtcttttttctatatttatctTGTTTCTTCAACAACCTTAATGCAAAACACAGCATAACCAACATTCACAAGAACCAGCATAGGCACAACAAGCACCTTCGTAATCCACCATTAAACCTAAGACTCTACCGCGCTTTTCTTGCGCTGCAAGCATGGAAACATGTGATCTACTCAGACCCGAAAAACATTACTGCCAATTGGGTAGGTCCCTCAGTTTGTAACTATACAGGTATCTACTGTGCTCCATCTCTTGATGATCCAAAACTAACCGTTGTCGCTGGCATTGACCTTAATCACGCAGACATAGCTGGTTTTCTACCAGAGGAATTAGCCTTCCTAAGTGACCTTTCACTTCTCCACCTCAATAGCAACCGTTTCTGCGGCATCATTCCAAAAACCTTCACCAACCTAACTCATCTCTATGAGCTTGACCTTAGCAACAACAGATTTGTTGGACCATTTCCTTCTGTCGTTCTTTCACTTTCTTCCCTTGCCTACCTCGACCTTCGTTACAACGAATTCGAAGGTCCATTACCTCCACAACTTTTCGACAAACCTTTCGATGCTTTTTTCCTTAACAACAATCGCTTCACAAGTTCTATTCCAAGAAATTTAGGGAAAAGCAAAGCTTCTGTCATGGTTTTCGCTAATAACAAATTTGGAGGATGTTTACCAGAAAGCATAGTAAACTTCGCCGATACTTTAGAAGAACTTCTCTTAATCAACACAAGCATTTCAGGTTGTCTTCCACCACAAGTTGGTTTTCTATACAAATTGAGAGTTTTAGATGTGAGTTTCAACAATATTGTTGGTCCTTTACCTTATAGTCTTGCAGGGTTATCTCATTTGGAACAGTTAAATTTAGGACATAATATGATGACTGGAATAGTTCCTATGGGAGTTTGTGAGTTACCAAACTTGgttaatttcactttttcttacaatttcttCTGTGAAGAAGAAGGCATTTGTAAGAATTTGACATCAAAGAACATAGTTTTTGATGATCGGCGTAATTGCTTGCCGGAGAAGGCACTGCAGAGGAGTGAAAAGGAATGTAGTGACAAACTTAAACAGCCACCAGTTGATTGCTTTGAGGTTTGTTGTGATGAAGGTGGTTTTGGGAAAAATGCTAGTGCTGGTTCTGTGGCTATTCCACCTTCTGCAATACCAGTAGCAGCAATGCCTGTTTCTGCTGCACCTCTTGTTGCACCAAGCTACCCTTGA 1275 0.3937 MASNSSCHSLTTCVLFLFFLYLSCFFNNLNAKHSITNIHKNQHRHNKHLRNPPLNLRLYRAFLALQAWKHVIYSDPKNITANWVGPSVCNYTGIYCAPSLDDPKLTVVAGIDLNHADIAGFLPEELAFLSDLSLLHLNSNRFCGIIPKTFTNLTHLYELDLSNNRFVGPFPSVVLSLSSLAYLDLRYNEFEGPLPPQLFDKPFDAFFLNNNRFTSSIPRNLGKSKASVMVFANNKFGGCLPESIVNFADTLEELLLINTSISGCLPPQVGFLYKLRVLDVSFNNIVGPLPYSLAGLSHLEQLNLGHNMMTGIVPMGVCELPNLVNFTFSYNFFCEEEGICKNLTSKNIVFDDRRNCLPEKALQRSEKECSDKLKQPPVDCFEVCCDEGGFGKNASAGSVAIPPSAIPVAAMPVSAAPLVAPSYP 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01619 424 Pfam Leucine rich repeat 132 189 IPR001611 GO:0005515
Tsu02g01619 424 Pfam Leucine rich repeat 274 331 IPR001611 GO:0005515
Tsu02g01619 424 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 422 - -
Tsu02g01619 424 PANTHER EXTENSIN-LIKE PROTEIN 1 422 - -
Tsu02g01619 424 SUPERFAMILY L domain-like 62 339 - -
Tsu02g01619 424 Gene3D Ribonuclease Inhibitor 232 367 IPR032675 -
Tsu02g01619 424 Gene3D Ribonuclease Inhibitor 62 231 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01619 Tsu-Chr2 14297420 14298724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01619 55 385 Leucine-rich Repeat extension Gene Families AT3G24480 54.985 1.79e-131 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01619 - - gmx:100802803 592.423