Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01613 ATGGTTTTGCAAACTAAATCACAAGTTAGTCTAACCACATTTGGAGAATTAGTCCTTAAGTCAAAAGAAATGAGTGGAAATGTTGTTGAGGGAGGGAATAAGGAGGGAAATATAACAGTGACATGGGAGAAACTAAGGGTCACTGTTCCAAATGgaaacaaaaaaaggaaagcAATTCTGCAGGATCTTACTGGTTATGCTCAACCTGGAAGAGTTTTGGCTGTTATGGGTCCTTCTGGCTCTGGAAAATCCACACTTCTTGATGCTTTAGCAGGAAGATTAAGCTCAAACATAAAGCACACAGGAAATATTCTAATCAATGGTCACAAACAAGCACTGGCTTATGGAATATCAGGGTATGTAACACAAGACGATGCTATGCTGTCAACATTAACGGCGGGAGAAACTTTATACTACTCGGCTCAACTTCAATTTCCAGATTCCATGTCCATAACAGAGAAGAAAGAACAAGCAGATATTATACTCAGAGAAATGGGTCTAATGGATGCTGTTAACACAAGGGTTGGAGGATGGAGTTCTAAAGGCCTAAGTGGTGGACAAAAGAGGAGACTTAGCATTTGCATCGAGATTCTAACTCGCCCGAGACTTCTCTTCCTTGATGAACCAACGAGCGGACTTGATAGCGCAGCTTCTTATTATGTTATGAGCAGGATTGCACGTTTGAATTTAAGCGATGGAATTCGAAGGACTATTGTTGTATCCATCCACCAACCTAGCAGTGAAGTTTTTGAACTTTTTCATGACCTTTGTCTTCTGTCTTCAGGCGAAACTGTGTATTTTGGTCCAGCCTATGATGCAAATCAGTTTTTTACTGCAAATGGTTTTCCTTGTCCAACACTCCATAATCCTTCAGATCACTACTTAAGGATCATAAACAAAGATTTTGAAATGGATGTTGAAGAAGGCTTTGGTAAGGGAGTAACCACAGAAGAAGCAATTGATATCCTTGTAAAGTCTTATAAGTCATCTCGAATTAGAAACCAAGTTAAAAAAGAAGTTGCAAAAATAAGTGAAAGTGACTCTGGTACAATAGGGAAGAAGAGGATCCATGCTGCATTTATCACTCAATGCCTTGTTCTTATAAGAAGATCTTCCTTGCAATTGTTTCGCGACATTGGCAATTATTGGCTCCGTTTAGTTGTCTTCATTTTAATTGCTATAAGCATTGGTTCTATCTTCCATGACATTGGTTCAAGTAATGGACCAGTATCTACTCAGGGGAGAGGTTCTCTGCTCACATTTCTTATATCAGTTCTTACTTTCATGACCCTTGTTGGTGGATTCTCTCCACTTTTGGAGGAAATGAAGGTATTTGAACGAGAGAGATTGAATGGACATTATGGTGTTACTGCTTTTCTAATTGGCAATATATTCTCTGCTATTCCTTACATGTTAATGATCTCTCTAATTCCTGGAGGAATAGCATACTATCTTTGTGGAATGCACAAAGGACTAGAAAACTTTATATACTTCATTTCATTGCTATTAGCCATTGTGATGTGGGTTGAGAGTCTTATGTTAGTTGTTGGAAGCATATCTCCAAATTATGTAATAGGAATGTTCATTACTGGTGGAATTGAAGGACTAATGATTTTAACTGGTGGATTCTATAGATTACCAAATGAACTTCCTAAACCAATATGGAAATACCCTTTATACCATATATCTTTCCTTAAGTATGCATTTCAAGGATCATTCAAGAATGAATTTGAAGGGTTAACTTTTTTGATGGGGACTAAAACCATAAGTGGTAGGGAAATATTGGCTGAGACATGGCATGTTGAAATGGGTCACTCTAAGTGGGTTGATCTTGCTATCATGTTTGgtatgattttattatatagAGTTCTATTCTTGGTAATCACCAAGAGCAAAGAGAAGTTGAAGACTTTTGTTGCAGTCATAAATGAAAAGGGTGGCATTACTGTGACATGGGAGAATTTGGAGGCAATTGTTACAAAtggaaagaatagaaaattAATTCTGCATGGACTTACAGGTTATGCCCAGCCAGGGAAGCTTTTGGCTGTAATGGGTCCTTCAGGCTGTGGCAAATCCACACTCCTTGATGCTTTAGCAGGAAGATTGAGATCAAACATACAACAGTCAGGGAAGATTCTAATCAATGGCAAAAAACAAACACTGGCTTATGGAACATCAGGTTATGTAACACAAGATGATGCTATGCCGTCAACTTTAACAGCTGGTGAAACTTTATACTACTCAGCTCAGCTTCAATTTCCAAACTCAATGTCCATAgcagagaagaagaaacaagCAGATATCACACTCAGAGAAATGGGGCTGCAAGATGCTATTAACACAAGGGTCGGAGGGTATGGTTCTAAGGGCCTAAGTGGGGGGCAAAAGAGAAGACTTAGCATTTGCATTGAGATCCTAACACACCCCAGACTCCTTTTCCTTGACGAACCAACCAGCGGACTTGATAGTGCAGCTTCCTACTATGTTATGAGTAGAATTGCAAGTTTGAGTCTAAGGGATGGTATTCAAAGGACAATAGTTGCATCCATTCATCAGCCTAGTAGTGAAGTTTTTGAGCTTTTCCATGACCTCTGTCTTCTTTCGTCTGGTGAGACAGTATATTTTGGTCCAGCATCTGAAGCAAATCAGTTTTATGCTTCAAATGGTTTCCCTTGCCCAACTCTCTATAATCCTTCTGATCACTACTTAAGGATCATAAACAAAGATTTTGAACAGGACACTGAAGAAGGATTTGGTAAAGGAGTAATTACTGAAGAGGCAATTGGTATCCTTGTAAATTCTTATAAGGCGTCCGAAATTAAAAGTCAAGTTCAGATCGAAGTGACAAAAATAAGTGAAAGTGATCCGGGTGCAATAAGGAATAGGAGGATCCACGCTCCATTTCAAACTCAGTGCATGGTTCTTATAAAAAGATCTTCTCTGCAATTGTATCGTGACATAAGCAATTACTGGTTACGCCTTGCTGTCTTTATTGCTTCGGCTATAAGCCTGGGCACTATCTTCTATCACGTGGGTACAAGTAATCCATCTATTCAGGTCAGAGGATCGCTACTTTCGTTTTTTATATCACTTGTGTCTTTCATGACACTTGTTGGTGGATTCTCTCCCTTGATTGAGGAAATGAAGGTGTTTGAACGAGAGAGATTGAATGGGCACTATGGTATTGCTGCTTTTCTCATTGGCAACATATTATCTGCTATTCCTTACATGCTAATGATCTCTCTCATTTCCGGAGTAATAATTTGTTACCTTTCTGGACTACACAAAGGACTAGAGCACTATTTATACTTTGCTTCTATCCTATTTGCCATTATGATGTGGGTTGAGAGCCTTATGATGGTTGTGGGGAGTATCTTCCCAAATTTTGTGATGGGTGTGATCATTGCTGGTGGAGTTGAAGGACTTGCAATTTTAACAGGTGGCTTCTATCGACTTCCTAATGATCTTCCAAAGCCATTATGGAA 3488 0.3839 MVLQTKSQVSLTTFGELVLKSKEMSGNVVEGGNKEGNITVTWEKLRVTVPNGNKKRKAILQDLTGYAQPGRVLAVMGPSGSGKSTLLDALAGRLSSNIKHTGNILINGHKQALAYGISGYVTQDDAMLSTLTAGETLYYSAQLQFPDSMSITEKKEQADIILREMGLMDAVNTRVGGWSSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIARLNLSDGIRRTIVVSIHQPSSEVFELFHDLCLLSSGETVYFGPAYDANQFFTANGFPCPTLHNPSDHYLRIINKDFEMDVEEGFGKGVTTEEAIDILVKSYKSSRIRNQVKKEVAKISESDSGTIGKKRIHAAFITQCLVLIRRSSLQLFRDIGNYWLRLVVFILIAISIGSIFHDIGSSNGPVSTQGRGSLLTFLISVLTFMTLVGGFSPLLEEMKVFERERLNGHYGVTAFLIGNIFSAIPYMLMISLIPGGIAYYLCGMHKGLENFIYFISLLLAIVMWVESLMLVVGSISPNYVIGMFITGGIEGLMILTGGFYRLPNELPKPIWKYPLYHISFLKYAFQGSFKNEFEGLTFLMGTKTISGREILAETWHVEMGHSKWVDLAIMFGMILLYRVLFLVITKSKEKLKTFVAVINEKGGITVTWENLEAIVTNGKNRKLILHGLTGYAQPGKLLAVMGPSGCGKSTLLDALAGRLRSNIQQSGKILINGKKQTLAYGTSGYVTQDDAMPSTLTAGETLYYSAQLQFPNSMSIAEKKKQADITLREMGLQDAINTRVGGYGSKGLSGGQKRRLSICIEILTHPRLLFLDEPTSGLDSAASYYVMSRIASLSLRDGIQRTIVASIHQPSSEVFELFHDLCLLSSGETVYFGPASEANQFYASNGFPCPTLYNPSDHYLRIINKDFEQDTEEGFGKGVITEEAIGILVNSYKASEIKSQVQIEVTKISESDPGAIRNRRIHAPFQTQCMVLIKRSSLQLYRDISNYWLRLAVFIASAISLGTIFYHVGTSNPSIQVRGSLLSFFISLVSFMTLVGGFSPLIEEMKVFERERLNGHYGIAAFLIGNILSAIPYMLMISLISGVIICYLSGLHKGLEHYLYFASILFAIMMWVESLMMVVGSIFPNFVMGVIIAGGVEGLAILTGGFYRLPNDLPKPLW 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01613 1162 Gene3D - 39 292 IPR027417 -
Tsu02g01613 1162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 655 886 IPR027417 -
Tsu02g01613 1162 Gene3D - 649 897 IPR027417 -
Tsu02g01613 1162 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 4 638 - -
Tsu02g01613 1162 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 643 1162 - -
Tsu02g01613 1162 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 4 638 - -
Tsu02g01613 1162 SMART AAA_5 678 871 IPR003593 -
Tsu02g01613 1162 SMART AAA_5 69 262 IPR003593 -
Tsu02g01613 1162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 277 IPR027417 -
Tsu02g01613 1162 Pfam ABC-2 type transporter 243 343 IPR043926 GO:0140359
Tsu02g01613 1162 Pfam ABC-2 type transporter 852 920 IPR043926 GO:0140359
Tsu02g01613 1162 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 40 286 IPR003439 GO:0005524
Tsu02g01613 1162 ProSitePatterns ABC transporters family signature. 792 806 IPR017871 GO:0005524
Tsu02g01613 1162 CDD ABCG_EPDR 38 268 - -
Tsu02g01613 1162 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
Tsu02g01613 1162 Pfam ABC transporter 60 211 IPR003439 GO:0005524
Tsu02g01613 1162 Pfam ABC transporter 670 820 IPR003439 GO:0005524
Tsu02g01613 1162 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 650 895 IPR003439 GO:0005524
Tsu02g01613 1162 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 643 1162 - -
Tsu02g01613 1162 Pfam ABC-2 type transporter 362 577 IPR013525 GO:0016020|GO:0140359
Tsu02g01613 1162 Pfam ABC-2 type transporter 971 1159 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01613 Tsu-Chr2 14224086 14268057 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01613 668 830 Calmodulin-binding Proteins AT2G36910 32.941 2.69e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01613 K05681 - gmx:100794527 1374.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01613 02 14224086 14268057 Tsu02g01613 02 14224086 14268057 ECH