Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01595 ATGGAGGACTATCACGTAGCAAAATTTGTCCATTTCAAAGGACACGAGCTAGGACTTTTTGCTATATACGATGGACACCTGGGAGACAGTGTACCATCATATTTGCAAAAGAATCTCTTTTCTAATATCTTGAAGGAAGACGACTTCTGGGAGGATCCATTCATGTCGATTTCTAAAGCTTACGAGTCAACAGATCAGGCAATTCTTACTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCCGTGACTGCAATTCTCATAAATAATCAGAAACTATGGGTTGCCAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGGGTAGCTGTACAGATGTCTACTGATCATGAACCTAATACGGAACGGGGAAGCATTGAGAATAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTGGCAAGAGTGAACGGGCAGCTTGCAGTTTCTCGAGCATTTGGAGACAAAAACCTGAAAACACACTTGCGATCTGATCCTGACATTCAGTACGCAGATGTTAACCAAGAGACCGAGTTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTTTTCAATTAA 582 0.4347 MEDYHVAKFVHFKGHELGLFAIYDGHLGDSVPSYLQKNLFSNILKEDDFWEDPFMSISKAYESTDQAILTHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRGGVAVQMSTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYADVNQETEFLILASDGLWKVFN 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01595 193 PANTHER PROTEIN PHOSPHATASE 2C 1 192 IPR015655 GO:0004722|GO:0006470
Tsu02g01595 193 SUPERFAMILY PP2C-like 1 192 IPR036457 -
Tsu02g01595 193 ProSiteProfiles PPM-type phosphatase domain profile. 1 193 IPR001932 -
Tsu02g01595 193 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 192 - -
Tsu02g01595 193 SMART PP2C_4 1 193 IPR001932 -
Tsu02g01595 193 Gene3D - 1 193 IPR036457 -
Tsu02g01595 193 Pfam Protein phosphatase 2C 15 192 IPR001932 -
Tsu02g01595 193 CDD PP2Cc 1 193 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01595 Tsu-Chr2 14007435 14011320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01595 1 193 PP2C-type Phosphatase Gene Family AT1G22280 73.869 6.23e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01595 K17506 - gmx:100776795 350.903