Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01592 ATGGCGGACCCTCCTTCTCGCCAATTACATCCTCGACCAGATTTTCAGCAGTTACAATTTGAAGCCCAACATCGGTGGTTACGCCCTGCAGAAATATTGGAAATTCTTCGTAATTATCAGATGTTTCAAATCACACCTGAACCGCCTAGCAGGCCACCAAGTGgatcactttttctttttgatcgGAAGGTTTTGAGATACTTCAGAAAGGATGGACACAACTGGAGAAAGAAGAAAGACGGAAAAACTGTGAGGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAGAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGATATGATGCATATAGTATTTGTCCACTACTTGGATGTTAAGGTTAACAAGACCAATATTGGTGCAAGCACAGATACTAAAGGGGTTACATCAGATTCCCAAAATGGCAGTTCTGTGTCATCTGGCTTTCCTGCAAATTATGGTAACATGCCTTCGGGAAGTGCGGATTCCATGAGCCCAACAAGCACTTTAACTTCTTTATGTGAAGATGCAGATTCAGAGGATATTCATCAAGCAAGCTCGGGATTTCACACTTTTCGTGAGACACAAAATCTGGGGAATGGTCCACTGATGGATAAGGTTGATGCTCGTTCAAATAGTTCATATCTTACACATCCCTTTTCAGGTGATCATGGTCAATTATCGTTTTCCGGACCAAATTACCTCCCACTTGTTCAGGGGGGTAAATCCAATCAAAGTGATGCTGCATATGCGGAGGGTCAGAGAGCACTCAACATAGCATCCTGGGACAATGTCATGGAGAAATCTGCAGGATTGCATGCTGATCCCTCCCTTGTATCATCTAATTCTATTCCATCAAGTTCAATGGGGAACATCCTTGAACAAGAGCATTCTGTCTTTACTGAAGGAAGGGCCTCACAGAGTCTACAATCAAATTGGCAGATTCCTTTTGAAGACAATACAGGAGAATTTCCTAAATGGAGCTTTACTCAGTCATTGAATTTGGAATTTGAATCTGATTATTCCACTGAACTACTGGGAAAAGAAACTAATAATGCAAGTTCAGAAATTGGTCCTGAcctattttgttttaattttgagCCAAAAGAGCAGCCTTTGCAGCAAAACTTGTCAAAGGAGCATACACCTGCACAATCTCAGGATACCCTGAAATCTGACCGTGGAGTTAACGGTGAACACAGTGCCAACTATTCCTTGAACATGAAGCATGCTTTTATGGCAGAAGAGAGCCTGAAGAAGGTTGATAGTTTCTCTAGGTGGATTTCTAAAGAACTTGCAGCGGTGGATGATCTGCACATGCAGTCTTCCCCTGGTATTTCATGGGGCACGGATGAATGTGGAAATGTGATAGATGATACCTCATTGAACCTGTCCCTATCTCAAGACCAGCTGTTTAGCATACATGATTTTTCACCTAAATGGGCTTATGCTGGATCAGATATTGAGGTGTTGATTATTGGAACATTTTTGAAGAGTAAACCAGAGGTGGCAACATGTAACTGGTCCTGTATGTTTGGGGAAGTGGAAGTTCCAGCTACAGTTTTAGCTAATGGAATTCTGTGCTGTCAAGCTCCACCTCATGAGATTGGACGGATCCCTTTCTACGTAACCTTTTCCAATAGATTCGCTTGTAGTGAAGTTCGGGAATTTGAGTTCAGAGAGGGCTTTACTAGGAATGTAGATTTGGCAGATTTTTTTAACAGCTCAACTGAAATGACGCTTCATTTACAACTGGAAGAGTTACTTACTTTGAATTCAGTGCATCTCTCGGATCAAGTTTTTGAGGTTGATATGGAGAAAAGAAACTTGATTCTTAAGCTTATTTCAATGAAAGAGGAAGAGGAATATTCGAGTAATGAAGAGCCAACTGGAGACATGGATATATCAAAACACAGGTTGGAGGCGCATATATTTCACAGGCAGGTTAAGGAGAAGCTGTACTCGTGGCTTCTTCACAAAGTAGCTGAAACTGGTAAAGGGCCTAATGTGTTTGGTAAAGATGGGCAAGGTGTATTACATTTAGTTGCTGCTCTTGATTATGATTGGGCCATAGCACCAATTGTAACTTCTGGAGTTAATATCAACTTCCGTGATGTGAATGGATGTACGGCTCTACACTGGGCTGCATCCTGTGGCAGGGAGCGAACGGTTGGTCTCCTTGTCTCCATGGGTGCCGCTGCTGGAGCATTGACTGATCCATGTACAGCATTCCCTTCAGGAAGAACACCTGCAGATATTGCTTCTAGCTGTGGCCACAAAGGAATTTCGGGTTTTCTTGCTGAGTCATTATTAACTAGCCACCTTGAATCACTCACCGTGGATGATGTGAATAACGATGGTGCAAAAGAAACTTTGGGAATGAAAGCAGTACAGACGATTTCAGAACGAATGGCAACACCTGTGTCTTGTGGTGATAAACCCGATGCTATCTGCCTTAAGGATACTCTCGATGCTGTCCGGAATGCTACACAAGCTCAGCATAGAATACATCAAGTATATAGAATGCAATCATTTCAAAGAAAGCAGTTAGCTCAGTATGAAGGCGATGATGAGTTTGGATTGTCAGATCAGCAAGCTCTTTCGCTTCTAGCCTCTAAGGCATGCAAATCTGGTCATGGGGATGGTTCAGTCAATGCTGCTGCAATACAAATACAGAAAAAGTTCCGTGGCTGGACAAAGAGAAAAGAATTCCTGTTCATTCGTCAAAGAGTTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAAGTAAGAAAGAAGTATAAATCAATCATCTGGTCTGTGGGAATCCTGGAGAAGGTTGTAATACGGTGGAGGCGTAAGGGCAGTGGTTTACGTGGATTTCGACCAGATGCTGTTATCAAGGCCCCCAACCAACCAAGCAACGATCCTGTGAAGGAGGATGATTATGATTTTCTCAAGGAAGGGAGGAAACAGAGTGAAGAAAGGTTCCAAAAGGCCCTTTCAAGGGTTAAGTCCATGGTTCAGTATCCAGAGGCCCGGGCCCAGTACAGGCGTCTGCTAAATGTAGTAGATGATTTCCGTCAAACCAAGGCATCTAATTCGAGTCCGATAAATTCGGAAGAGGCAGTTGATGGTGTTGAGGATTTGATTGATATCGACATGCTTTTGGATGATGATAATTTCTTACCTGTAGTATTTGATTGA 3234 0.423 MADPPSRQLHPRPDFQQLQFEAQHRWLRPAEILEILRNYQMFQITPEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLDVKVNKTNIGASTDTKGVTSDSQNGSSVSSGFPANYGNMPSGSADSMSPTSTLTSLCEDADSEDIHQASSGFHTFRETQNLGNGPLMDKVDARSNSSYLTHPFSGDHGQLSFSGPNYLPLVQGGKSNQSDAAYAEGQRALNIASWDNVMEKSAGLHADPSLVSSNSIPSSSMGNILEQEHSVFTEGRASQSLQSNWQIPFEDNTGEFPKWSFTQSLNLEFESDYSTELLGKETNNASSEIGPDLFCFNFEPKEQPLQQNLSKEHTPAQSQDTLKSDRGVNGEHSANYSLNMKHAFMAEESLKKVDSFSRWISKELAAVDDLHMQSSPGISWGTDECGNVIDDTSLNLSLSQDQLFSIHDFSPKWAYAGSDIEVLIIGTFLKSKPEVATCNWSCMFGEVEVPATVLANGILCCQAPPHEIGRIPFYVTFSNRFACSEVREFEFREGFTRNVDLADFFNSSTEMTLHLQLEELLTLNSVHLSDQVFEVDMEKRNLILKLISMKEEEEYSSNEEPTGDMDISKHRLEAHIFHRQVKEKLYSWLLHKVAETGKGPNVFGKDGQGVLHLVAALDYDWAIAPIVTSGVNINFRDVNGCTALHWAASCGRERTVGLLVSMGAAAGALTDPCTAFPSGRTPADIASSCGHKGISGFLAESLLTSHLESLTVDDVNNDGAKETLGMKAVQTISERMATPVSCGDKPDAICLKDTLDAVRNATQAQHRIHQVYRMQSFQRKQLAQYEGDDEFGLSDQQALSLLASKACKSGHGDGSVNAAAIQIQKKFRGWTKRKEFLFIRQRVVKIQAHVRGHQVRKKYKSIIWSVGILEKVVIRWRRKGSGLRGFRPDAVIKAPNQPSNDPVKEDDYDFLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVDDFRQTKASNSSPINSEEAVDGVEDLIDIDMLLDDDNFLPVVFD 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01592 1077 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Tsu02g01592 1077 Gene3D Immunoglobulins 483 578 IPR013783 -
Tsu02g01592 1077 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 3 1077 - -
Tsu02g01592 1077 Pfam IPT/TIG domain 490 563 IPR002909 -
Tsu02g01592 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 900 950 IPR027417 -
Tsu02g01592 1077 MobiDBLite consensus disorder prediction 146 188 - -
Tsu02g01592 1077 ProSiteProfiles Ankyrin repeat region circular profile. 723 748 - -
Tsu02g01592 1077 SMART iq_5 899 921 IPR000048 GO:0005515
Tsu02g01592 1077 SMART iq_5 922 944 IPR000048 GO:0005515
Tsu02g01592 1077 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Tsu02g01592 1077 SMART CG_1_2 18 136 IPR005559 GO:0003677
Tsu02g01592 1077 MobiDBLite consensus disorder prediction 389 413 - -
Tsu02g01592 1077 Pfam IQ calmodulin-binding motif 902 920 IPR000048 GO:0005515
Tsu02g01592 1077 Pfam IQ calmodulin-binding motif 925 944 IPR000048 GO:0005515
Tsu02g01592 1077 Gene3D - 899 947 - -
Tsu02g01592 1077 SUPERFAMILY Ankyrin repeat 678 784 IPR036770 -
Tsu02g01592 1077 ProSiteProfiles IQ motif profile. 923 947 IPR000048 GO:0005515
Tsu02g01592 1077 SMART ANK_2a 762 791 IPR002110 GO:0005515
Tsu02g01592 1077 SMART ANK_2a 723 752 IPR002110 GO:0005515
Tsu02g01592 1077 Gene3D - 656 793 IPR036770 -
Tsu02g01592 1077 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 3 1077 - -
Tsu02g01592 1077 SUPERFAMILY E set domains 490 576 IPR014756 -
Tsu02g01592 1077 ProSiteProfiles Ankyrin repeat profile. 723 755 IPR002110 GO:0005515
Tsu02g01592 1077 ProSiteProfiles IQ motif profile. 901 929 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01592 Tsu-Chr2 13986454 13994163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01592 1 1058 CAMTA Transcription Factor Family AT5G64220 51.070 0.0 1016
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Tsu02g01592 CG-1 2.2e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01592 K21596 - gmx:100795682 1620.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01592 02 13986454 13994163 Tsu08g04315 08 61102516 61112655 PCT