Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01573 ATGAATGCTTCATCTTTAACCTCGAGCCTAAGTATTTCAAATTCAAAGCAATTTCATCACCTTTCACAACTCTCAAGTAAACAACAAAGACCTTGTCAAGTGCACTTTGCAACAATTTCATGTAGAGCAACAAAGCTAGTGGAAGAAACCAAGAATGGATCAAATTTCTACAAAATGTTATCCGTGAATCCGAAAAACGCAACAATGGAAGAGATAAAGAAAGCTTATAGATCAATGGCACTTCAATATCATCCAGATGTGTGTCATGATCCTTCGATGAAAGAGGAATCAACGAGAATATTTGTTCGATTAAATGCGGCTTATGAAACTTTGTCGAATCCTATGCTTCGTGAACAATATGATAGTGAATTGGGATTGAAAAACAATATGatgaatatgaataatattgttAATCAAGAGATTTGGAGAAGTAGGTGGCAAGAACAAGTGGTTGAGTTGAAGAAAAGGTCTTCAAGACGTATGGGACAAAAAGGAAGTAGAATGAGGACACAAAACATGAAAAATagaaactaa 534 0.339 MNASSLTSSLSISNSKQFHHLSQLSSKQQRPCQVHFATISCRATKLVEETKNGSNFYKMLSVNPKNATMEEIKKAYRSMALQYHPDVCHDPSMKEESTRIFVRLNAAYETLSNPMLREQYDSELGLKNNMMNMNNIVNQEIWRSRWQEQVVELKKRSSRRMGQKGSRMRTQNMKNRN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01573 177 SUPERFAMILY Chaperone J-domain 35 120 IPR036869 -
Tsu02g01573 177 ProSiteProfiles dnaJ domain profile. 55 124 IPR001623 -
Tsu02g01573 177 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 2 176 - -
Tsu02g01573 177 CDD DnaJ 55 113 IPR001623 -
Tsu02g01573 177 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
Tsu02g01573 177 Gene3D DnaJ domain 42 150 IPR036869 -
Tsu02g01573 177 SMART dnaj_3 54 116 IPR001623 -
Tsu02g01573 177 PRINTS DnaJ domain signature 76 91 IPR001623 -
Tsu02g01573 177 PRINTS DnaJ domain signature 96 116 IPR001623 -
Tsu02g01573 177 PRINTS DnaJ domain signature 58 76 IPR001623 -
Tsu02g01573 177 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 2 176 - -
Tsu02g01573 177 Pfam DnaJ domain 55 121 IPR001623 -
Tsu02g01573 177 MobiDBLite consensus disorder prediction 154 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01573 Tsu-Chr2 13867441 13868133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01573 3 134 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.676 2.02e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01573 - - gmx:100811478 207.994