Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01571 ATGAGTTCCTTCCGAGTCCTCTCCACTACTGTAATCCATGCACCAAATCACAGTCTTTGTGACTCAACTAGTCATACAATCGAACTAACACCATGGGATCTACAATTCCTTCCCTATAAAGTCAACCAAAAGGGGCTTCTTTATCATCACCCTTTTGAATTGGACACATCAAATCAAATACAACACCTTAAAAACTCTCTTTTTTCTACGCTTGAATTTTTCCCACCTTTTACAGGTCGTCTCAAAATAACGGAATACGAAAATGACACTGTCTCGTGTTCCGTCTCGTGCAATAATGAAGGTGCTATCTTTGTCCATGCCACAGCAGAAAATACTAGTGTCACCGACATCCTCGGATCCTCTTATATTCCTCAAATTGTCCACTCATTTTTTCCACTTAATGGAGTTAAAAATTACGAAGGGATATCACAACCACTACTTGCAGTCCAAGTAATAGAATTAGTTGACGGCATCTTCATTGGCTGCACAATCAACCACgttgttgttgatggtaagTCGTTTTGGCATTTCATCAATTCATGGGCTGAAATTTCAAATGGGTGTCATAAAATATCCAAATGTCCAACATTCAAACATTGGTTTCCAAAAGATATCGAATGTCCCATTCGATTTCCTTtcataaaagaacaaaaaaatagcaATTCCTCTAAAGAGGAAATGCTCAACCCACCaaggaaaatatttcattttacaaaagagaatattacaaaattgaaattcagAGCGAACTCAGAGGTTGGTAAAAAGAACATATCTTCGTTACAATCTCTTTTCAGTCACATTTGGCGCACTATTGTACGTTCAACTAAATTTGACGGACAAGAAGAAGTGCATTACATGATTTCCATAGGCATCAGACCAAGGTTGATTCCTCCGTTACAAGAGGATTATTTTGGAAACGCTATGATAGATTGTGTGGTTACTATAAAAGTTAGTGACCTGTTGGGAGACGGGGGGCTCGGTAAAGGTGCATTGGAAATGAACAAGATGATTGCTTTACACTCCGATGAAAAGTTGAAATATCACTATGATAATTGGTTGACTACGCCAAGTTTTGTTAACATTGATGAGGCCAATAGTAAATTACTAGTGATTAGTGGTTCGCCTTGGTTTAATGTTTATGGTAATAATTTCGGTTGGGGGGAACCTGTGGGGGTTCGAAATGGTGGTGAAAATATAAGAAAGGGAAATATTTGTGTGTTTGCAGGTGTAGAAGAAGGTAGTATGgatcttgaagtgtgtctttcCCATGAAAATTTAGAGTCAATTGAAAATAATCCTGAGTTTATGGACTATGTTTCAAGCTAG 1329 0.3544 MSSFRVLSTTVIHAPNHSLCDSTSHTIELTPWDLQFLPYKVNQKGLLYHHPFELDTSNQIQHLKNSLFSTLEFFPPFTGRLKITEYENDTVSCSVSCNNEGAIFVHATAENTSVTDILGSSYIPQIVHSFFPLNGVKNYEGISQPLLAVQVIELVDGIFIGCTINHVVVDGKSFWHFINSWAEISNGCHKISKCPTFKHWFPKDIECPIRFPFIKEQKNSNSSKEEMLNPPRKIFHFTKENITKLKFRANSEVGKKNISSLQSLFSHIWRTIVRSTKFDGQEEVHYMISIGIRPRLIPPLQEDYFGNAMIDCVVTIKVSDLLGDGGLGKGALEMNKMIALHSDEKLKYHYDNWLTTPSFVNIDEANSKLLVISGSPWFNVYGNNFGWGEPVGVRNGGENIRKGNICVFAGVEEGSMDLEVCLSHENLESIENNPEFMDYVSS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01571 442 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 439 - -
Tsu02g01571 442 Gene3D - 3 208 IPR023213 -
Tsu02g01571 442 Pfam Transferase family 22 437 - -
Tsu02g01571 442 Gene3D - 214 432 IPR023213 -
Tsu02g01571 442 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01571 Tsu-Chr2 13856212 13857540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01571 61 432 Monolignol Biosynthesis Gene Families AT5G48930 24.173 1.71e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01571 - - gmx:100500257 469.929