Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01563 aTGGGAGatcataataatattaacaataatGTTAATCTTCCACCCGGTTTTCGATTTTATCCAACCGATGAAGAACTTGTCGTCCATTTCCTTCATCGAAAGGCTTCCCTTTTACCTTGTCATCCAGATGTTATTCCTGATCTTGACCTCTATCCATTTGATCCATGGCAACTTCAAGgAAGAGCTTTGGAAGAGGGAAATCAATGGTACTATTATAGTAGAAGGACACAAAATAGAATGACTAATAATGGTTATTGGATGCCAATGGGAATGGAAGAACAAGTTTTAACAAGCTCAAGTAATAAGAGAGTTGGTATGAAGAAATATTATGTTTTTCATATTGGTGAAGCACCTGATGGTAACAAAACTAATTGGATAATGCAAGAGTATCGTCTTTCCGATTCCGCTTCTTCCTCTACTAGATCATCTTCAtccaaaagaaaatcaaaatccGAACATAGTAGGTGGGTGATATGTCGAGTTTATGAACATGATGAAGATGACGATCAGGATGGAGATGGAACCGAATTGTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGATGAAGTAAGCTTGCCAAATTAG 594 0.3519 MGDHNNINNNVNLPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLDLYPFDPWQLQGRALEEGNQWYYYSRRTQNRMTNNGYWMPMGMEEQVLTSSSNKRVGMKKYYVFHIGEAPDGNKTNWIMQEYRLSDSASSSTRSSSSKRKSKSEHSRWVICRVYEHDEDDDQDGDGTELSCLDEVFLSLDDLDEVSLPN 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01563 197 Gene3D NAC domain 22 168 IPR036093 GO:0003677|GO:0006355
Tsu02g01563 197 ProSiteProfiles NAC domain profile. 13 164 IPR003441 GO:0003677|GO:0006355
Tsu02g01563 197 PANTHER NAC TRANSCRIPTION FACTOR 56 10 194 - -
Tsu02g01563 197 SUPERFAMILY NAC domain 7 162 IPR036093 GO:0003677|GO:0006355
Tsu02g01563 197 Pfam No apical meristem (NAM) protein 14 132 IPR003441 GO:0003677|GO:0006355
Tsu02g01563 197 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 10 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01563 Tsu-Chr2 13787071 13788000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01563 1 163 NAC Transcription Factor Family AT1G61110 41.954 9.92e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu02g01563 NAM 4.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01563 - - gmx:100788893 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01563 02 13787071 13788000 Tsu08g04357 08 61457248 61458450 PCT