Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01560 ATGGAGGATTTATCAAAGAATCAAATTTTCGCTCTTCATGGGATTGTTGGTGCTGGCTCAATTGCTTTAGCCACTGCTTTCACCTATCCTCTTGACACTATCAAACTCCTTACTCAGGTTGGTTCTAGTGCTGGTAAAGAATTGAATGCTAACCAGGTTGTTTTGAGAGTACTCTCCGTATCAGGGAATAAAGGTTTGTTCAGTGGTTTTGGGTGGTTGGCATTTGGAAGGGTTTTTGGTGTAGGAGCACGATTTGGGGTTTATGAAATCCTGACAGCCTATTGTAAAgATGGTCGGGGAGATAATTATGTCACTATGTCTGAGGCTCTTTTGGCTGGCATGGTTGCTGGTGCCACAGAGACATTCATAAGCTCTCCATTTGAACTCATCAAGCTTCGTATGCAAGTTGCCGCTGCTTCATATGTTCCAAGCTCTAACTTTGCTCTGGAAGAGGGGGCTCGCAAACCGCTAGTTGCAAGATTACTCAACGGCTGTTATCCAGACAAGAGGTCTTTGAATCAATATGTTGGTCTCATGTCTACCCTAACAACCAAGAACACTAACATAACAGGTGATTTACTGGAGTATCCCTGGGCAATGACAGGATCTGGGAGGCCACCATCAGTTTGCAATGTGAGAAGACCATCAGACATTATATCTTTGGAAGGATGGAACGCATTGTGGAGAGGTCTCCGTTCTGGAATTGTTCGAGATTCTGTGTTTGGTGGTGTATTTTTTTCGAGTTGGCAATTTTTGCACCAAATAATGCTTGATTGGAAGGCTGTAGGGATGAATCCTCAACCCAGGTTAAATGAAGAAATTCCTCCGTTGTCTCCTTTGGCTGTTACTCTTGCTGCTGGATTTTCTGGTTCAGTTGCTGCTGCTGCTTCTCATGGTTTTGATACTTCTAGAAGTAGATCACAATGTACTGTGCTGCCAAAGTATGTCTCAATGGAGAGAAGGTTACTGAAATGGAAACGACCAGGAACCAAGTTTCAAAGATTTACTGGGATCCATCCTTCTGACAGGAATATCTTGTTCCGTGGTCTCGGGTTGCGGATGGCTCGCTCTGGTGTTGCATCGTTCATGATTGTAGGAAGTTATTTATTTGCTGTTGATCATCTTGCCTCTAGTTTGACTTAA 1143 0.4348 MEDLSKNQIFALHGIVGAGSIALATAFTYPLDTIKLLTQVGSSAGKELNANQVVLRVLSVSGNKGLFSGFGWLAFGRVFGVGARFGVYEILTAYCKDGRGDNYVTMSEALLAGMVAGATETFISSPFELIKLRMQVAAASYVPSSNFALEEGARKPLVARLLNGCYPDKRSLNQYVGLMSTLTTKNTNITGDLLEYPWAMTGSGRPPSVCNVRRPSDIISLEGWNALWRGLRSGIVRDSVFGGVFFSSWQFLHQIMLDWKAVGMNPQPRLNEEIPPLSPLAVTLAAGFSGSVAAAASHGFDTSRSRSQCTVLPKYVSMERRLLKWKRPGTKFQRFTGIHPSDRNILFRGLGLRMARSGVASFMIVGSYLFAVDHLASSLT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01560 380 PANTHER CARRIER PROTEIN 2 376 - -
Tsu02g01560 380 Gene3D Mitochondrial carrier domain 11 379 IPR023395 -
Tsu02g01560 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 255 IPR018108 -
Tsu02g01560 380 SUPERFAMILY Mitochondrial carrier 11 365 IPR023395 -
Tsu02g01560 380 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 2 376 - -
Tsu02g01560 380 Pfam Mitochondrial carrier protein 11 93 IPR018108 -
Tsu02g01560 380 Pfam Mitochondrial carrier protein 105 142 IPR018108 -
Tsu02g01560 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 94 IPR018108 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01560 29 250 Antiporters AT1G79900 22.519 1.56e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01560 - - gmx:100813634 599.742