Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01552 ATGGCCTCCCAAATtggagcaaaatctaatggaatttcaccaaacaattttcaaattgagATTCCTATTCATaccaaaaatgttgaaaaagaAAGCAACATTGACTACTTTCAAAGGGCACAGTGGCTTAGAGCAGCCATGTTAGGAGCCAATGATGGATTAATCACTGTTGCTTCATTGATGATTGGTGTTGGAGCTATAAAAGAAGATATCAGTGTAATGCTCCTTGCCGGTTTTGCCGGTTTAGTAGCAGGTGCTTGTAGCATGGCAATCGGTGAGTTTGTTTCTGTTTATACTCAATATGATATTGAGATAGCAcaaattaaaagagaaagagaattagcaaataataataatgatgaagaAAGTAGTGAAAGAGAGAAATTGCCAAATCCATTTCAAGCAGCATTAGCATCAGCACTTGCATTTTCTGTTGGTGCACTAATGCCATTGCTAGCAGCTGCATTTATAAAGAATTATAAGATTAGAATGAGTGTTGTTGCCGCTGTGGTGAGTTTTGCATTGTTAGTGTTTGGATCAATGGGAGCATTGATTGGAAAAACTCCAGTTATGAGGTCTTGTGTTAGAGTTCTTATTGGTGGTTGGATGGCTATGGCTATTACTTTTGGTTTCACCAAATTGATTGGCACCACTGGACTTTAA 663 0.3303 MASQIGAKSNGISPNNFQIEIPIHTKNVEKESNIDYFQRAQWLRAAMLGANDGLITVASLMIGVGAIKEDISVMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEIAQIKRERELANNNNDEESSEREKLPNPFQAALASALAFSVGALMPLLAAAFIKNYKIRMSVVAAVVSFALLVFGSMGALIGKTPVMRSCVRVLIGGWMAMAITFGFTKLIGTTGL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01552 220 Coils Coil 98 125 - -
Tsu02g01552 220 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 217 IPR008217 GO:0005384|GO:0030026
Tsu02g01552 220 CDD Nodulin-21 41 189 - -
Tsu02g01552 220 Pfam VIT family 43 122 IPR008217 GO:0005384|GO:0030026
Tsu02g01552 220 Pfam VIT family 124 212 IPR008217 GO:0005384|GO:0030026
Tsu02g01552 220 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01552 Tsu-Chr2 13710861 13711662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01552 29 220 Nodulin-like Gene Family AT3G43660 64.062 4.30e-92 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01552 K22736 - gmx:100802489 298.516