Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01550 ATGAGTTCTCCACAAGCTCTTAATATCATATTCCAATTTCCTCTCTTTGTTCAATTTCAACACTTAGCTTTATTGTACCTTAATTTGTCCTTCAATATGGCCTCCCAAATtggagcaaaatctaatggaatttcaccaaacaattttcaaattgagATTCCTATCCATACCGAAAGTGTTGAAAAAGAGAGTAACATTGACTACTTTCAAAGGGCACAGTGGCTTAGAGCAGCCATGTTAGGAGCCAATGATGGATTAATCACTGTTGCCTCATTGATGATCGGTATAGGAGCTATAAAAGAAGATATTAGTGTAATGCTCCTTACTGGTTTCGCCGGTTTAGTAGCCGGTGCTTGTAGCATGGCAATCGGTGAGTTTGTTTCTGTTTATACTCAATACGATATTGAGATAGCACAAATTAAAAGAGAAAGGGAATtagcaaataataataatgatgaagaAAGTAGTGAAAGAGAGAAATTGCCAAATCCATTTCAAGCAGCATTAGCATCAGCACTTGCATTTTCTGTTGGTGCACTAATGCCATTGTTAGCAGCTGCATTTATAAAGAATCATAAGATTAGAATGGGAGTTGTTGCTGCTGTTGTGAGTTTTGCATTGTTAGTGTTTGGATCAGTGGGAGCATTGATTGGAAAAACTCCAATTATGAAGTCTTGTGTTAGAGTTCTTATTGGTGGTTGGATGGCTATGGCCATTACATTTGGTGTCACCAAATTGATTGGCACTACTGGACTTTGA 759 0.3478 MSSPQALNIIFQFPLFVQFQHLALLYLNLSFNMASQIGAKSNGISPNNFQIEIPIHTESVEKESNIDYFQRAQWLRAAMLGANDGLITVASLMIGIGAIKEDISVMLLTGFAGLVAGACSMAIGEFVSVYTQYDIEIAQIKRERELANNNNDEESSEREKLPNPFQAALASALAFSVGALMPLLAAAFIKNHKIRMGVVAAVVSFALLVFGSVGALIGKTPIMKSCVRVLIGGWMAMAITFGVTKLIGTTGL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01550 252 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 33 249 IPR008217 GO:0005384|GO:0030026
Tsu02g01550 252 Coils Coil 130 157 - -
Tsu02g01550 252 CDD Nodulin-21 73 221 - -
Tsu02g01550 252 Pfam VIT family 75 154 IPR008217 GO:0005384|GO:0030026
Tsu02g01550 252 Pfam VIT family 156 244 IPR008217 GO:0005384|GO:0030026
Tsu02g01550 252 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 33 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01550 Tsu-Chr2 13693289 13694047 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01550 61 252 Nodulin-like Gene Family AT3G43660 64.583 8.02e-92 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01550 K22736 - gmx:100802489 304.293