Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01549 ATGGCCTCCCAACTTGGAGCAACAACCAATGGAATTTCAccaaacaattttcaaattgagATTCCAATCCATGCCAATAGTACTACTATAGTGGataaaaaacagaaccaaagTGTTGATGAAAATGAGAGTAACAACATTGATTACTCTCATAGAGCACAATGGCTTAGAGCAGCCATGTTAGGAGCTAATGATGGATTAATCACTGTTGCTTCATTGATGATTGGTATTGGAGCTATAAAAGAAGATATCAGTGTAATGATCCTTGCTGGTTTTGCCGGTTTAGTAGCCGGTGCTTGTAGCATGGCAATTGGTGAGTTTGTTTCTGTTTATACTCAATATGACATTGAGATAGCTCAGATAAAAAGAGAAAGTGAATTATCAAATAGTAATAATGATGAAGAAAGTAGTGAAAGGGAGAAATTGCCAAATCCATTTCAAGCAGCATTAGCATCAGCACTTGCATTTTCTGTTGGTGCACTAATGCCATTGTTAGCAGCTGCATTTATAAAGAATCATAAGATTAGAATGGGAGTTGTTGCTGCTGTTGTGAGTTTTGCATTGTTATTGTTTGGATCAGTTGGAGCATTGATTGGAAAAACTCCAGTTGTGAGGTCTTGTATTAGAGTTCTTATTGGTGGTTGGATGGCTATGGCCATTACATTTTGTGTTACCAAATTGATTGGCACTACTGgactttga 702 0.3519 MASQLGATTNGISPNNFQIEIPIHANSTTIVDKKQNQSVDENESNNIDYSHRAQWLRAAMLGANDGLITVASLMIGIGAIKEDISVMILAGFAGLVAGACSMAIGEFVSVYTQYDIEIAQIKRESELSNSNNDEESSEREKLPNPFQAALASALAFSVGALMPLLAAAFIKNHKIRMGVVAAVVSFALLLFGSVGALIGKTPVVRSCIRVLIGGWMAMAITFCVTKLIGTTGL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01549 233 Pfam VIT family 56 135 IPR008217 GO:0005384|GO:0030026
Tsu02g01549 233 Pfam VIT family 138 225 IPR008217 GO:0005384|GO:0030026
Tsu02g01549 233 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 230 - -
Tsu02g01549 233 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 230 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01549 Tsu-Chr2 13688455 13689156 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01549 36 233 Nodulin-like Gene Family AT3G43660 62.121 2.31e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01549 K22736 - gmx:100790996 299.671