Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01547 ATGGTTGTTGGTACAATTTGTGATTCCGAGTCACTAAACCATGCAGTCACAATTCCAAATGCTACAAAGGAAatggaagaaaaacaaattcaaatcacaaaagaaaataataacagTACTAATATTGATTATTGGCAAAGAGCTCAATGGCTTCGCGCCGCCGTATTAGGAGCAAATGATGGATTAGTTTCCGTTGCTTCACTAATGATGGGAGTAGGAGCGGTTAAAACCGATAGCACAGCAATGTTAGTCGCGGGTTTTGCAGGATTAGTCGCAGGAGCATGTGGTATGGCAATCGGAGAATTTGTTTCGGTTTTCACTCAATATGAAGTCGAAGTTGGTCAAATGATGAGAGATTTAGGAACAAGCgatagaaaagagaaagaattggAAATTCAATTGGAGAAAAGGAAATCATTGCCTAATCCATTACAAGCTGCTTTAGCTTctgcattttcattttctatagGTGGTTTGGTTCCTTTACTTAGTGGTTCATTTATAAGTGATTATAAGATAAGGCTTATTGTGATTGTTTCAATAGCTAGTTTGGCTTTGGTTGTTTTTGGAAGAATTGGTGCTATGCTTGGTAAGACACCAAAAGTGAAATCTTCTATTAGGTTTCTTCTTGGTGGATGGATGGCTATGGCAATCACTTTTGGGTTAACTAAATTACTTGCACATTCTAGTGGTTTGGATTTTTGA 705 0.3404 MVVGTICDSESLNHAVTIPNATKEMEEKQIQITKENNNSTNIDYWQRAQWLRAAVLGANDGLVSVASLMMGVGAVKTDSTAMLVAGFAGLVAGACGMAIGEFVSVFTQYEVEVGQMMRDLGTSDRKEKELEIQLEKRKSLPNPLQAALASAFSFSIGGLVPLLSGSFISDYKIRLIVIVSIASLALVVFGRIGAMLGKTPKVKSSIRFLLGGWMAMAITFGLTKLLAHSSGLDF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01547 234 CDD Nodulin-21 49 201 - -
Tsu02g01547 234 Coils Coil 18 38 - -
Tsu02g01547 234 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 2 227 IPR008217 GO:0005384|GO:0030026
Tsu02g01547 234 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 2 227 - -
Tsu02g01547 234 Pfam VIT family 51 118 IPR008217 GO:0005384|GO:0030026
Tsu02g01547 234 Pfam VIT family 124 223 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01547 Tsu-Chr2 13685344 13686048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01547 24 232 Nodulin-like Gene Family AT3G43660 57.416 3.05e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01547 K22736 - gmx:100810586 275.789