Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01545 ATGGAAAGCATGTGGGATAAGTTGAAGCCAGCCTTGCTAATGATTGGGGTGCAAATAGTATTTTCTGCTTGCAATATTCTTTACAAGTTTGCCATATTTGATGGAATGAGTACTATTGTCATTGCAGCTTATCGCTTAGCCTTTGCAGCTGTTACCACTATTCCTCTTgctcttttttttgaaagGAAGAGGCCGAAGATGACTTGGAGGGTGTTTAACCTTTCACTTCTAAGTGGATTATTTGCTGGACTTTTATTTCAAAACCTATTCTACGGAGCTTTGGTTTTGGCACAAGCAACTCTTGTATCAGCTATCTACAACCTTGTTCCCTCCATCACCTTTGTCTTGGCTGTTTCCTTCGGTTTAGAGAAGTTAAATTGGGGAGCAGCAACAGGAAAGGCAAAGGTTGCAGGAACTATACTTGGACTTGCTGGTGCATTGTTGTTGATATTTTACAAAGGATTTGAATTTGATATTTGGCCTTTTGCAATCAATCTTTTGGATCCAAACAAAAGCCAAACAGAACATGTCACTGATACTACATCTGAATTGTTAGGTGTTATCTGTGTTATACTTAGTTGCTTCTGTTTCTCAATTTGGCTCATCATTCAGGCAAAGATTAGTGAAGTATATCCATGCCCTCAATCAAGCATAGCTTTGATGTCAATAATAGGAACAATACAATGtgttattttaggtttcattgTTGAGAGGGATTTGAATGAATGGAAGCTTGGTTGGGATGTTAGGCTCATCACTGTCACTTTTTCGGGTATTTTGGCATCTGGAGTAATGCTTCTTGTGATGGCATGGGTCGTACAGACGAAAGGGCCTTTATATGCGTCCGCTTTCAACCCTCTAATGCTTTTGTTTGTAGCTTTTGTCGCATCTATGATTCTAGATGAGAAGTTAAACTTAGGAagTATACTCGGAGGAGCGTTGATTGTGTGTGGCCTATACACGGTACTATGGGGTAAAGGTAGAGAATTACAAAAGAAGATTGAATTAGAGCCAACACAAATCATTGGTGATTTCGAAGCTACGAGACCATTGTTGAGTCCATGA 1065 0.384 MESMWDKLKPALLMIGVQIVFSACNILYKFAIFDGMSTIVIAAYRLAFAAVTTIPLALFFERKRPKMTWRVFNLSLLSGLFAGLLFQNLFYGALVLAQATLVSAIYNLVPSITFVLAVSFGLEKLNWGAATGKAKVAGTILGLAGALLLIFYKGFEFDIWPFAINLLDPNKSQTEHVTDTTSELLGVICVILSCFCFSIWLIIQAKISEVYPCPQSSIALMSIIGTIQCVILGFIVERDLNEWKLGWDVRLITVTFSGILASGVMLLVMAWVVQTKGPLYASAFNPLMLLFVAFVASMILDEKLNLGSILGGALIVCGLYTVLWGKGRELQKKIELEPTQIIGDFEATRPLLSP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01545 354 PANTHER WAT1-RELATED PROTEIN 11 347 - -
Tsu02g01545 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
Tsu02g01545 354 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Tsu02g01545 354 PANTHER WAT1-RELATED PROTEIN 11 347 IPR030184 GO:0016021|GO:0022857
Tsu02g01545 354 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020|GO:0016021
Tsu02g01545 354 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Tsu02g01545 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01545 Tsu-Chr2 13666517 13671065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01545 3 332 Nodulin-like Gene Family AT1G68170 38.973 1.06e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01545 - - mtr:MTR_4g094340 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01545 02 13666517 13671065 Tsu08g04375 08 61662866 61693782 PCT