Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01543 ATGAAGGACATATACAATTCATTGGAAGGACTAAAACCAATCGTGCTAATGGTGTTTGTGCATATTGCATATGCTGCTGTGAATATCATATACAAGCTCGTCATAAATGAGGGAATGAGCATGAGGGTGGCTACCGCTTACCGCCTCACTATTGCGTCGGCTTTCACCATTCCCCTTGCTCTTCTTATCTTTGATAGGTCCATTTTTagaCCAAAAATTACTTGGAAGGTTCTTCTTCTAGCATTTTTATGTGGATTGTTTGGGGGTAGTTTATTTCTAAATCTTTATGGTGTTGGCTTAGATTTGACATCAGCAACGTTTATGTTGTCCATTTCCAACCTTGTTCCAGGAATTACCTTCATCATGGCCATTTCCTCCGGATTGGAAAAGCTAAATTGGGGAGTAGTAGAGGGAAAAGTCAAGGTATTAGGAACACTAATTAGCATTGTTGGGGCAATGGTGGTAATATTTTACAAAGGAGTGGAAATTAATATTTGGTCTTCCAATATTAATCTTATGCATCAACATCATAACCAAAATGGGCTTCTTGAACCAAAACATAAAGACTTCAGTAATAAGATATTGGGTGTTCCATGTGCCATAGCAAGCATTTGCTCTTTTTCTTTGTGGTTAATCATTCAGGCTAAGTTGAATGAAGAATATCCATGTCATCTTTCATGCTCAGCAATGATGTGCACAATGGGTGCACTTCAGGCAATTGTTGTTGCTCTTTGTGTCGATAGGGATTGGATTGAATGGAAGCTCGGTTACGATATTCGACTTTTCACGGTGGTCTTTTCGGGAATTGTACCCTCCGGATTAGTGATTATTGTTGTTGCTTGGTGCATAAAGATGAGAGGTCCTTTATTTGCAGCCGTTTTCAATCCTCTCCAGCTTTTACTTGTAGCTATCTTTGCTTATTTATTGGTGGATGAGAAGTTATATTTAGGAAGTGTCCTTGGAGCAGTGTTGATCGTGTGCGGCCTATATGCAGTGCTTTGGAGTAAAAgcaaagaaatggaaaaagagACACAATTATTATCATTAAAAACTAACATTGAGCTTAAAGCAGAGGAAATTGCTATGTCTAATACTGAAAAGTGTATCCAAAGCAACAAGACTGAAAACAATACTATTGAGATTAATGTTACCAATGATCAATTatga 1167 0.3719 MKDIYNSLEGLKPIVLMVFVHIAYAAVNIIYKLVINEGMSMRVATAYRLTIASAFTIPLALLIFDRSIFRPKITWKVLLLAFLCGLFGGSLFLNLYGVGLDLTSATFMLSISNLVPGITFIMAISSGLEKLNWGVVEGKVKVLGTLISIVGAMVVIFYKGVEINIWSSNINLMHQHHNQNGLLEPKHKDFSNKILGVPCAIASICSFSLWLIIQAKLNEEYPCHLSCSAMMCTMGALQAIVVALCVDRDWIEWKLGYDIRLFTVVFSGIVPSGLVIIVVAWCIKMRGPLFAAVFNPLQLLLVAIFAYLLVDEKLYLGSVLGAVLIVCGLYAVLWSKSKEMEKETQLLSLKTNIELKAEEIAMSNTEKCIQSNKTENNTIEINVTNDQL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01543 388 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 8 357 - -
Tsu02g01543 388 PANTHER WAT1-RELATED PROTEIN 8 357 IPR030184 GO:0016021|GO:0022857
Tsu02g01543 388 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020|GO:0016021
Tsu02g01543 388 Pfam EamA-like transporter family 12 156 IPR000620 GO:0016020|GO:0016021
Tsu02g01543 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01543 Tsu-Chr2 13652714 13656122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01543 11 366 Nodulin-like Gene Family AT1G25270 39.722 1.38e-85 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01543 - - cam:101515687 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01543 02 13652714 13656122 Tsu08g04377 08 61714547 61717103 PCT