Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01542 ATGGTTAAATTATTTAGTGTTGAAACCATAGAGAATGCAAAGCCTATTGTATTGATGATAGTGGTCCAATCAATATATGCAGTGGTGAATATCATGTTAAAGATGGTAACAAATGATGGATTGAGCTTAAGTGTACTTATTGCTTACAGATTTGTCTTTTCAACTGCCTTTACTGTGCCACTTGCTCTCTTCTTTGAAAGGAGAAGTGTGCAAAACCTGTCAGGAAAGGTGCTATTCCAAGCTTTTCTTTGTGGGTTATTTGGGGGATCCTTACAACAAAACCTCTATGTTAAATCTTTGGCCCTGGTATCAGCAACATATACTATAACCATGTTAAACCTCATCCCTGCCATTACCTATGTCATGGCGGTTTCTCTTAGAATGGAGAAGCCAAATCTTGGAACACCAGCTGGGAAAGCCAAGTTGATAGGAACTTTAAGTGGAATTGGTGGTGCCATGATTCTCACTTTATACAAAGGCAAAAGattatttaacttttcaatGCACATTGACTTATTGCAACAATATGTGACATCAACACCACATAAGTCCCCTGCTGGTTCTCATGTTTGGGGTATCATGCTAGCTTTAGGCACTTCTCTTAGTTTCTCATTATGGTATATAACTCAGTCAAAGATGGCTGCAAATTTTCCGTGGCACTATTCAACTGCGGCATTAACCTCTTTAATGGGTGCGATCCAATCCTTTGTATTTGCTCTTTGTACGGAGAGAGATCGCAGACAATGGAAGATTGATTGGAATTTGAGGCTTTTAACGGCAGCTTCTGGGGGTATATTAGCATCTGGGGTGTGCTTTGTCCTATTAGCTTGGTGTGTCCGCATGAAAGGACCCTTATATGTGTCTGCTTTTAATCCTCTATTGCTTGTGCTTGTTGCCTTCATTGCATCGTTGGTACTAGATGAGTACATTACAGTTGGAAGTCTAACAGGAGCAGCATTGATTGTGTGTGGATTGTACATGTTATTGTGGGGTAAAAGCAAAGAAGCAAGACAAGTGGATAATAATATGAATGAAATAGTATCTGtaaaagactctgataaatGTGATTCAATTCACATTCCAAACTCATCTTTAACTTGCATCCAAAAGGATCATGACAAGAATACTTTAGGAGAAGTTTAA 1143 0.3815 MVKLFSVETIENAKPIVLMIVVQSIYAVVNIMLKMVTNDGLSLSVLIAYRFVFSTAFTVPLALFFERRSVQNLSGKVLFQAFLCGLFGGSLQQNLYVKSLALVSATYTITMLNLIPAITYVMAVSLRMEKPNLGTPAGKAKLIGTLSGIGGAMILTLYKGKRLFNFSMHIDLLQQYVTSTPHKSPAGSHVWGIMLALGTSLSFSLWYITQSKMAANFPWHYSTAALTSLMGAIQSFVFALCTERDRRQWKIDWNLRLLTAASGGILASGVCFVLLAWCVRMKGPLYVSAFNPLLLVLVAFIASLVLDEYITVGSLTGAALIVCGLYMLLWGKSKEARQVDNNMNEIVSVKDSDKCDSIHIPNSSLTCIQKDHDKNTLGEV 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01542 380 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Tsu02g01542 380 Pfam EamA-like transporter family 15 138 IPR000620 GO:0016020|GO:0016021
Tsu02g01542 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 160 - -
Tsu02g01542 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 334 - -
Tsu02g01542 380 PANTHER WAT1-RELATED PROTEIN 13 369 - -
Tsu02g01542 380 PANTHER WAT1-RELATED PROTEIN 13 369 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01542 Tsu-Chr2 13638775 13641786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01542 14 356 Nodulin-like Gene Family AT1G25270 36.522 4.06e-78 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01542 - - mtr:MTR_4g094360 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g04377 08 61714547 61717103 Tsu02g01542 02 13638775 13641786 PCT