Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01536 ATGAGCCCGGCTTGCGTTTTAAACACAACGCCACCTCATTCCACCGTTGAATCACAAAACGACGacgcacaactccaccttcaGACAAGCCGCCGTCGTATACGCGGTGTCGTATCTGAGAAACGCCGTTCCCAGATCTGCTCACAAAGAGCGTCCTCAACGCATGGCGTCGTCgaagAAACtgcaaaacaacaacaaccaaccAACGAAAACCCAACAATTGACGACGTTGCCGGTAGTGGCACAACTCATCATGATCATCACCATCAACATCCTCATCCTTCTTCCGGTGAAGGTCTCTTTGCCAACAGTTCCGGTGCTGATGAAGGTACtattgaagatttcttggtgaGAGCTGGTGTTGTTCCTGCTCCTCATCAATATCCTTCTTCCGACGCTTCAGCTTCTCATCAAGTCGCTATGGGAAAACAAAAGGCTGTTGAAGAAACACTTGAACCTGATAAAGCTGCTATTCAGAAAGAGGAAAAAAGGATCAAGAATCGTGAGGCCGTTGCTAGGTGCAGAGAACGCGAAAAGGCTCGTAATACTAAGACTGAGGACCGGGTTAAGAGCTTGAAGACGAAGATTAAGAAGTTATTAGAAGAACAGGCTGAGAAGGAAAAGCAGAGGCACAAAATGCTCAAAGAGTCAGTCATTCTAGTTACAGAGCAGcctaaaccaaaaaagaaactGCGGAGAACCAATTCAGATTAA 714 0.4174 MSPACVLNTTPPHSTVESQNDDAQLHLQTSRRRIRGVVSEKRRSQICSQRASSTHGVVEETAKQQQPTNENPTIDDVAGSGTTHHDHHHQHPHPSSGEGLFANSSGADEGTIEDFLVRAGVVPAPHQYPSSDASASHQVAMGKQKAVEETLEPDKAAIQKEEKRIKNREAVARCREREKARNTKTEDRVKSLKTKIKKLLEEQAEKEKQRHKMLKESVILVTEQPKPKKKLRRTNSD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01536 237 PANTHER OS05G0437700 PROTEIN 67 236 - -
Tsu02g01536 237 Pfam Basic region leucine zipper 160 208 IPR004827 GO:0003700|GO:0006355
Tsu02g01536 237 Coils Coil 175 217 - -
Tsu02g01536 237 MobiDBLite consensus disorder prediction 1 25 - -
Tsu02g01536 237 SUPERFAMILY Leucine zipper domain 159 213 IPR046347 GO:0003700|GO:0006355
Tsu02g01536 237 Gene3D - 146 219 - -
Tsu02g01536 237 MobiDBLite consensus disorder prediction 1 107 - -
Tsu02g01536 237 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 67 236 IPR043452 GO:0003700|GO:0045893
Tsu02g01536 237 MobiDBLite consensus disorder prediction 42 78 - -
Tsu02g01536 237 MobiDBLite consensus disorder prediction 204 237 - -
Tsu02g01536 237 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 157 213 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01536 Tsu-Chr2 13580146 13583695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01536 108 227 bZIP Transcription Factor Family AT1G03970 31.544 7.76e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g01536 bZIP_2 1.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01536 - - cam:101514708 123.635