Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01526 atggagagagaagaagaagaatccaAAAAGATGGAAATTGATCTCTCTTTGAAGAtagatagtgatgatgatgatgagcaAGTAGAAGAAATAGAAGATCATGATCAAGTGAAAGAGGATGAGAAGGAAGAAGTTCATGAAGCTACACCTGGTGAAATTGAAGATGATTCATCAGTGATTCAACTATCTTTGCAAGataacacaaaaacaaaagagTTAAGTGCCTTAGAAATGGAAATGGAGAGTatgaaagaagaaaacaaagttTTAAGGAAAGTGGTGGAACAAACAATGAAAGATTACTATGATCTACAAACCAAATTTTCAGTCATccaagaaaataatattaaaagaaagGATCATACACTTTCTCTCTCACTACAAGACAATAATGCAACAACAAGTGGTGAAGGACCATCAAGATTAATTCATGAGATCTTTagtaaaaatattgaaagaaatCCTTCTCCATTACCACAAAATAATATTGATCATGATAGTATAAGTGAGAGTGATTTGGGTTTATCACTAAGGTTGCAAACAAGCACATGTGAGAAAGATaatattgaagaaaataaagaagCTGGCAAAAGAGAACAATTGGCAAGTTTTGAAACAGTGCAGAATAAATTTCAAAGAGTACATGAGTTGCCAGCTGGTATTACTACTCATGCAGCTGCTTATTCTCCTCCTAATAGAAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAACTGCCACAatgaatgatggaTGTCAATGGAGAAAATATGGACAAAAAATTGCAAAAGGAAATCCATGTCCACGAGCTTATTATCGTTGCACGGTAGCCACAGGTTGTCCCGTTAGAAAACAGGTGCAAAGATGTATAGATGACATGTCTATACTAATTACAACCTATGAAGGAACACATAACCATCCACTACCTGTTGGTGCAACTGCTATGGCATCAACAGCATCAGCAGCAACTTCATTTATGTTACTAGATTCAAGCAACCCTAATTCAGATTATGGTTACACAACTCAACAAACCTTTAATAATCCTTACATTAATAGTAATACCTTCCACCACTCATTAAACCAATCTTCAAATATTAGAAACATAAACCCTAATGATCCATCACAAGGCATTGTTCTTGACCTCACCAATAACAATAATCTCAACGAACCGCGACATTTTTCGACCGGAGGTAGCTCTAGCTCGACTTCAACTGATCAACATCGTTTTTCTTGGATGCAAAACAAATACAATCAACAAAGTAGTACTAGTAGTAGTGCTAATATTGCAATGAATAATTTTTACAAACCATTGGAAATTCATGATAGGAGTTGGAAAAGTGATCAAGAAAGTAATAatagcaacaacaacaatgttACTGCAATTGCATCAGATCCTAAGTTTAGGCTTGCTGTTGCAGCTGCAATTTCATCACTCATGAATAAAGaaagcaacaacaacaatactagcaacaattga 1476 0.3089 MEREEEESKKMEIDLSLKIDSDDDDEQVEEIEDHDQVKEDEKEEVHEATPGEIEDDSSVIQLSLQDNTKTKELSALEMEMESMKEENKVLRKVVEQTMKDYYDLQTKFSVIQENNIKRKDHTLSLSLQDNNATTSGEGPSRLIHEIFSKNIERNPSPLPQNNIDHDSISESDLGLSLRLQTSTCEKDNIEENKEAGKREQLASFETVQNKFQRVHELPAGITTHAAAYSPPNRKARVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVATGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAATSFMLLDSSNPNSDYGYTTQQTFNNPYINSNTFHHSLNQSSNIRNINPNDPSQGIVLDLTNNNNLNEPRHFSTGGSSSSTSTDQHRFSWMQNKYNQQSSTSSSANIAMNNFYKPLEIHDRSWKSDQESNNSNNNNVTAIASDPKFRLAVAAAISSLMNKESNNNNTSNN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01526 491 MobiDBLite consensus disorder prediction 38 53 - -
Tsu02g01526 491 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 12 488 IPR044810 GO:0003700
Tsu02g01526 491 Pfam WRKY DNA -binding domain 249 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g01526 491 Gene3D WRKY domain 233 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g01526 491 Coils Coil 179 199 - -
Tsu02g01526 491 MobiDBLite consensus disorder prediction 361 406 - -
Tsu02g01526 491 Coils Coil 66 100 - -
Tsu02g01526 491 SUPERFAMILY WRKY DNA-binding domain 241 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g01526 491 MobiDBLite consensus disorder prediction 1 56 - -
Tsu02g01526 491 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 12 488 - -
Tsu02g01526 491 SMART WRKY_cls 248 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g01526 491 MobiDBLite consensus disorder prediction 1 17 - -
Tsu02g01526 491 MobiDBLite consensus disorder prediction 18 37 - -
Tsu02g01526 491 ProSiteProfiles WRKY domain profile. 243 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01526 Tsu-Chr2 13467152 13469764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01526 22 376 WRKY Transcription Factor Family AT1G68150 45.753 2.80e-83 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu02g01526 WRKY 3.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01526 - - gmx:100820209 538.11