Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g01514 | ATGGCTACCACAATTTCAATAACTTGCTTCATCTTTATTCCTATAATAATTTTATCATCATTATGTCCCATAACAACATTATGTGCAACAGTCCTAGAAGACCTCAAAAACTTACACAAACCACAAGATTTCAACACTACAATTTTCAACAACTGTATCAAAAACCCATCTCTTAGATACTGCAATTCTTCTCCTATGATAGACCTTGATGAAATATTCAAACACACTATTGTTGCTAGTCATCTTTGCAATGAATCCAGCAATCCCAATTGTGTTGAATCGTTCCCGAAAATCGATCTTCGAAACCGACCAAACATTGCATCTCTTTACTTGTCTTTCACTTTCTTTTGGAAATATTGTCCATTGAGTATTCTATCTATTGATTTCTCTAACAATTCTGTAAAGGGTAGTTTTCCAAATGATGTTCTTTATTGTACTCAAATTCAATCTCTTGATTTAAGTCTCAATGAATTTTCTGGTGAAATTCCTATTGAAAGTTTCTCTCCATTAACTAATCTCACTTTTCTTAACCTCTCTTATAACTGTTTCTCAGAGAGTGAATTTTCTGATTCACAGTTCTTCAAAATGTTTAATTCTTCTAGTTTTCTTCATTCTGGTGCTCTCATTGATCATAAAAAGTTTACTATAAAAGCTATCATTTTATTGGTTGGTTTTCCTATTCTTGTTATTTTGATGGTAATTTTCTTGGCATGGCTTTGTTTTCAAAGGCCTGATTTTCTTCCAAGAATACTTTATAGTAGAAGGTTTACATTTACGCCGGCAATTCTAAAGGCGGCAACTTACGGTTTTTCGAAGGAAAATTTGGTTGGTAAGAGTGATATTGTTCATATCTATAAAGGAGTGTTAAGAGATGGAACTAAAGTGAAAATTGAGATGTATTGGGATGATATATCAAGGGATAGTTATCATAAATTTGTTGAGGAATGTAAGATACTTTCTGAGTTAAACCATAAGAATCTTGTTAAGGTTTTAGGGTGGTGTAAAGGTAGAAAATTCAGGGCTATTATAACAGAATGGACAAAAGATGAAAATGTTGAAATGTGGCTATCAAGGGAAGCACCATCATGGAATCATAGAGTGAAAGTTTTGATGGGAGTTGTTGAATGTATGCTATATTTACATGATGAATGGCCTGAAGTTGATTATGATCTCAAGACAAGTAGTGTTTTGTTATCTGATAATCTTGAACCATTGATTTCAAGGTTTCAAGTTGGAGACAGAAACAACAGTAGAAAAAAGATATGCAAGTTTGGAGTATTTTTGCTAGAGATGATACTAAACAAGAGTATTCAAGAGGAGTTTGATGGAAATGATATTGGATTTCTTAGCTACATGAGAACCCTTCATCATGCAGAGTTGCAACAAATGATTGATGAAAGAATGGATTTAAATGAAACAACTTTgcatcaaattaaacaagcttTATCACTAGGATTAATGTGCATAGACCAATCAAACAATGAGCATCCAAGTTTGGCACATATATTGAATATTCTATCAAAGGCATATAAGGCTAACCTTGTTTTGACATCTACAAATCATAAAACATTTCACGGAGATAAAGTTAAGGGACACAAGCGAGTTCAGTTTAGATAA | 1617 | 0.3234 | MATTISITCFIFIPIIILSSLCPITTLCATVLEDLKNLHKPQDFNTTIFNNCIKNPSLRYCNSSPMIDLDEIFKHTIVASHLCNESSNPNCVESFPKIDLRNRPNIASLYLSFTFFWKYCPLSILSIDFSNNSVKGSFPNDVLYCTQIQSLDLSLNEFSGEIPIESFSPLTNLTFLNLSYNCFSESEFSDSQFFKMFNSSSFLHSGALIDHKKFTIKAIILLVGFPILVILMVIFLAWLCFQRPDFLPRILYSRRFTFTPAILKAATYGFSKENLVGKSDIVHIYKGVLRDGTKVKIEMYWDDISRDSYHKFVEECKILSELNHKNLVKVLGWCKGRKFRAIITEWTKDENVEMWLSREAPSWNHRVKVLMGVVECMLYLHDEWPEVDYDLKTSSVLLSDNLEPLISRFQVGDRNNSRKKICKFGVFLLEMILNKSIQEEFDGNDIGFLSYMRTLHHAELQQMIDERMDLNETTLHQIKQALSLGLMCIDQSNNEHPSLAHILNILSKAYKANLVLTSTNHKTFHGDKVKGHKRVQFR | 538 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g01514 | 538 | Gene3D | Transferase(Phosphotransferase) domain 1 | 421 | 509 | - | - | |
Tsu02g01514 | 538 | Gene3D | Phosphorylase Kinase; domain 1 | 252 | 346 | - | - | |
Tsu02g01514 | 538 | Gene3D | Transferase(Phosphotransferase) domain 1 | 349 | 420 | - | - | |
Tsu02g01514 | 538 | Pfam | Protein tyrosine and serine/threonine kinase | 274 | 425 | IPR001245 | GO:0004672|GO:0006468 | |
Tsu02g01514 | 538 | SUPERFAMILY | Protein kinase-like (PK-like) | 252 | 510 | IPR011009 | - | |
Tsu02g01514 | 538 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 9 | 537 | - | - | |
Tsu02g01514 | 538 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 9 | 537 | - | - | |
Tsu02g01514 | 538 | Gene3D | Ribonuclease Inhibitor | 32 | 212 | IPR032675 | - | |
Tsu02g01514 | 538 | ProSiteProfiles | Protein kinase domain profile. | 270 | 538 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g01514 | 538 | SUPERFAMILY | L domain-like | 71 | 188 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g01514 | Tsu-Chr2 | 13394688 | 13396962 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g01514 | 126 | 528 | Receptor kinase-like Gene Family | AT5G45780 | 22.547 | 8.23e-27 | 112 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Tsu02g01514 | PK_Tyr_Ser-Thr | 2.3e-13 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g01514 | - | - | gmx:100779045 | 804.283 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu02g01514 | 02 | 13394688 | 13396962 | Tsu02g01514 | 02 | 13394688 | 13396962 | ECH |