Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01494 ATGAAGGAATTGATCATAGCAGCATTCAATGCAACAACTGATGAACTCACCAACCAGATTAATAACTCAACACTTTACAAGGAATTGGCTACCAATGACATGACAAAACAAGCTATGGAAATTTGCAAAGAAGTCCTTGGTTATGCAGTTGATGATGTTCATGAATCAATTAATACATTGGATCAATTTGATCTAAGTAAATATGCTTATGATCTTAAGGTTTGGTTAGCAGGTACAATTACTCATCAACAAACATGCTTAGATGGATTTGAGAACACAACTACTCATGCAGGACAAACCATGACTAAGGTTCTTAACACATCATTGGAGCTAAGTAACAATGCTTTTGATATAATTAATGGAGTTGCAAACTTTGTGAAAAACCTTAACTTAAGTTCTTTTACAAGTGAATTGAATAATAGGAAACTTTTGTCTTATGATGATGGTTTCCCAACATGGGCTAGTGAAAATCAAAGGAAACTTCTTGAAACCATTTCTAAATAG 504 0.3333 MKELIIAAFNATTDELTNQINNSTLYKELATNDMTKQAMEICKEVLGYAVDDVHESINTLDQFDLSKYAYDLKVWLAGTITHQQTCLDGFENTTTHAGQTMTKVLNTSLELSNNAFDIINGVANFVKNLNLSSFTSELNNRKLLSYDDGFPTWASENQRKLLETISK 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01494 167 PANTHER PECTINESTERASE 2 163 - -
Tsu02g01494 167 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 122 IPR035513 -
Tsu02g01494 167 SMART PMEI_2 1 118 IPR006501 GO:0004857
Tsu02g01494 167 Coils Coil 158 167 - -
Tsu02g01494 167 CDD PMEI-like_3 2 124 - -
Tsu02g01494 167 PANTHER PECTINESTERASE 2 163 - -
Tsu02g01494 167 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 121 IPR006501 GO:0004857
Tsu02g01494 167 Pfam Plant invertase/pectin methylesterase inhibitor 3 117 IPR006501 GO:0004857
Tsu02g01494 167 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 120 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01494 Tsu-Chr2 13277809 13278312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01494 3 163 Carbohydrate Esterase AT3G05610 37.195 1.01e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01494 K01051 - gmx:100800194 241.891