Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01490 ATGGTTGACCATCTTTCAGTTGTGAGGATAGCTAATCAaAACTACGCTGAAGTAGAGACAGAGTTTGTACGCAGGCATATCGGTCAATTACAAGAATATTggaagataaaaaaatatgatactGGCTATCACAAGTTGCGATTCAACAACGACTATGAAAATCCTTTAATATTGATTCAAGGCTGGAATAAGTTTAGGGACTTTCACGAGTTGCCTACAAATGTGGAGATTGAGCTTGCTTACTATGGTGATAATGTGTTTGAAATCTTTAGTATCAATGACCTTGATAATGGTCGTCATATTTCATCATTTCATAGTAGGAGCCTTCATCCAGGACGGACAAGAGTTTTCAATATACCTCTTACTCCTACAACCGTTGATCTACCATATTTaAAATTAAATATGGAACTTGCTACTTTCCTTCAAAAATGGAAGATCCAAGATCTTATCCTATGTGGAGATAACGGAAACAAATACAACATTGCAGTTTTGAACAATACCAATATCGAAAACATGGAATTAGGCTACAATTGGAGAGACATCTCCAAAGCTCTCACATTCAAAGTAGGGGATACTATTCGCTTCAAGTTTGAGATCAGTAACCAACGTTTGTATCCTGAGATTCAACCCAATTTTGTTGCACAACAAtacaaaaaactgaaaaagaagTGGCATGTCTTCAACAATAACGACGAATCAACAACTTTGGGTTTCAATAAGGATTATGTACATCCACTTATACGAGCCGGTTGGAAGGAATTCCAAAATCTCAACAATCTACCTGACAATGTAGAAGTGACGTTAGCTTATTACGGACCAGGAGTATTCAACATTGTTTCATTTAAAGAGATATCTACACATGAAGAACTTCAAACATTCCACAGTCGTAGTATTAAACCCACTGAAACGATTTTCTTCGACATTCTCATGCATACCGATAACCTTGAATCAAAGAAATTGCCATTGCCATTCAAGTTTGCAAAGTTTTTGAACGAAAATTGGTTGTTTTTCCTGCTACTATTGGGAGATGATGGGCATAAagaatatttttctattattcaCTTTGAACTTTCAAACAACACTTCATTGGGAGATACATGGAATGATTTTGCGAAAGAGCTGTCCTTCAAAACTGGAGACACCATACGTTTCAAATTCGACCTTTCCCACTTGAATGGAAACTGCAAAGTCTATAAATTAGAGTAA 1206 0.3491 MVDHLSVVRIANQNYAEVETEFVRRHIGQLQEYWKIKKYDTGYHKLRFNNDYENPLILIQGWNKFRDFHELPTNVEIELAYYGDNVFEIFSINDLDNGRHISSFHSRSLHPGRTRVFNIPLTPTTVDLPYLKLNMELATFLQKWKIQDLILCGDNGNKYNIAVLNNTNIENMELGYNWRDISKALTFKVGDTIRFKFEISNQRLYPEIQPNFVAQQYKKLKKKWHVFNNNDESTTLGFNKDYVHPLIRAGWKEFQNLNNLPDNVEVTLAYYGPGVFNIVSFKEISTHEELQTFHSRSIKPTETIFFDILMHTDNLESKKLPLPFKFAKFLNENWLFFLLLLGDDGHKEYFSIIHFELSNNTSLGDTWNDFAKELSFKTGDTIRFKFDLSHLNGNCKVYKLE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01490 401 SUPERFAMILY DNA-binding pseudobarrel domain 113 198 IPR015300 -
Tsu02g01490 401 Gene3D - 298 399 IPR015300 -
Tsu02g01490 401 ProSiteProfiles B3 DNA-binding domain profile. 305 401 IPR003340 GO:0003677
Tsu02g01490 401 SUPERFAMILY DNA-binding pseudobarrel domain 302 387 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01490 Tsu-Chr2 13169417 13171637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01490 121 382 REM Transcription Factor Family AT2G24690 25.468 3.89e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01490 - K15183 mtr:MTR_4g085790 125.946