Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01489 ATGGACACGTTAAGGCTATCAATGGTTGTCGGAAAGCGGCTGGAGAACCATGAAGAAcagttaatgctcatcattcagATGTTGGACCTTACGAATGCCTATTGGTCAACTGTCTTTGGGCTGCTTACTTTGCGCGGGGAGAGTCATGATGAACAGTTAATGCTCATCATCCGATGTTTGACGTTACGATTGCGCAGGGCAAGTTGTCCGCTGACTATTGGTCAACTGTCTCTCGACTGCTTACTTTGGACTTTGCTCGACGGTCCAAAGAGCATGCTCAAAACGCTAGAGAGGTATCAGAAATGCAACTATGGTGCACCTGAGACTAATGTGTCTGCACGAGAAGCCTTGGAGTTAAGCAGTCAACAGGAATATTTGAAGCTGAAAGCACGTTATGAAGCATTACAAAGGTCCGAGAGGTTTGTAGCAGCAATATTGTTGGCAACTTACTCAGGATTGCTGTATGGTCTATATGTTCCAGATTGGCAGTTTAATGTATCAGCCTCCACTTCTTCGTTGCCTCCAATAATTGGTAAAATAGAATCCGCGAAAAATGTCAGCATGGAGTGA 570 0.4333 MDTLRLSMVVGKRLENHEEQLMLIIQMLDLTNAYWSTVFGLLTLRGESHDEQLMLIIRCLTLRLRRASCPLTIGQLSLDCLLWTLLDGPKSMLKTLERYQKCNYGAPETNVSAREALELSSQQEYLKLKARYEALQRSERFVAAILLATYSGLLYGLYVPDWQFNVSASTSSLPPIIGKIESAKNVSME 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01489 189 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL9 HOMOLOG 90 142 - -
Tsu02g01489 189 PANTHER SERUM RESPONSE FACTOR HOMOLOG 90 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01489 Tsu-Chr2 13139651 13144492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01489 91 140 MADS-box Gene Family AT1G24260 80.769 6.31e-21 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01489 - - egt:105962401 98.5969