Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01482 ATGGCAAAAGGTCTTCACAATGATGTAACAAATCTTCAAAACAATCTTACAATCATCAATGCTTTCATTCTTGATgctgaaaacaaacaaacacaaagtaacTCTATTTCTCTTTGGCTTCATCAACTCAAGTATGCTTTATTTGATGCTCGTGATGTTCTTGATGAGATTGAATGTGAATCTTTGAGGAATCATGTTGTTAAAACTAAAGGAAACTTCAATACTAAGGTACAAcgttttttatcattttctagTAACCCTTTTGCTTTTCGTGTTAAGATGGCTAATAAGATTAAAGATGTAAATCATAAGATAGATGAGATTTGTAATCTTAGGATGAAATTGGGTTTATCAGTGTCAGTGAATCATGCAAGTGGAAGTGGAAATGACAATAGTAGTATTAGGATTAGGACTAAGAGAGAAACTCATTCTTATGTTAAGTCTTCTCATGTGATTGGTAGAgatgaagagaaagaaaagattattaggttTTTGATGGATCCACCATtagttgatgatgataatgatgatgatattggTGTTATTCCAGTTGTTGGGATTGGTGGTTTGGGAAAGACAACACTTGCTCAGTTAGTTTATAATGATGATAGGGTGATTGAGTTTTTCGAGTTGCGTATGTGGGTGTATGTTTCTGATGAATTTGATGTTAAGAGGTTAGTTTCGGAGATTCTTAAAGCGATGCATGGAATGGAAGTAGATGCTCAGATGCATAGTTTTGATTACTTGCAAAATCTGCTTCGCGAAAGATTACGAGGGACGAAGTTTTTACTTGTTCTAGATGATGTTTGGAATGAGGATTATAGAGAATGGCTTGAATTGAAAAAACTATTAATAGGGATGAATGATGACAAAGATGGTAATAAGCTCGGTAATAAGATTATCACGACCACTCGTAGTGATAGGGTGGCTTCGATAATGGGGAATGCTAATAAACACAATTTGAAGTATCTCCCAGAAGAAGAGTGTTTAAGGCTTTTTGTTAAGCATGCATTTTCAGCAGGAGAGGAGAAACGGTATCCGAGGCTTGTTGAAATTGGGAAGGACATTGCTAGGAAGTGTAAAGGGTTGCCCCTAGCAGTTGTAAGTTTAGGGTGTTTGCTTTACAATAGAGTTGATGAAAGTGAGTGGAAGAAAGTAAGAGATAGTGATATTTGGAAAGTGAACCCTCAAGATGATGGCGGCATTTTGGCTGCATTGAAACTAAGCTATAATCACTTGTCACCTGGATTGAAACAATGTTTCTcttattgttcaatttttcctAAGGGTTATGAGTATACTAATTTGGAACTGATTTCTTTTTGGATGGCGCATGGATTACTGCAAACTAGAAATGAAGACGAGGAACCAGAAGAGGTCGGGGAGTTTTATATTCAGGAGCTAGTTTCAAGGTCTTTCTTTGAATGTGCTTCCGAAGAACAACTCGTTATTGACGGTCTTATTTCTGAAGAACTTGATCTTCTAGGCATCTCCTTTTTCAAAACGCATGATCTTATTCACGACCTTGCCGTGTTCACAATGCAAAATGAAAGGAAAGTAGTAAAGTTTAATTCAACAAATATTCAAGAAAAAGTGCAGCATTTGTCATTCTCAGACAGTGGCGAGGGAGTTCCTGCCTTTGGTAAAATGTCGAGAAAGATTCGAACCATTGGATTCTGGCATGCGTTTCAAAAGGAACTTGCAATCACCGAACCGTTTGTTAAATGGATCTCCAACAAGTTCAAGTATCTCAGGGTGTTGAATATTCAAGGTTCTGATTTTCAGTTCTTACCGGAGTGTTTCGACAAAATGAAGCATTTGAGGTATCTTGATCTAAGCTATTGCCGGAAGTTGGAAAAACTCCCAGATTCCATTTGCAAGCTTCAAAGCCTAGAGATATTAAATCTCTGGAAATGTATAGCACTTGCATATATTCCCCCGAAATTGAGGAACCTTGTCAGCCTTAGGATTTTGTGGATTACCATAACAATCACTGATTTATCTTTCATAGGCATTGGGAACTTGAAAAatctacaaattttaattttgtggaATTGTGATAATTTGGTCTCCCTTCCACGCGATTTGAGGCACTTAACTTCTTTAAAGAGACTGACTATTGAGGCTTGTGACGAGGTGATTAGTTTTGACGACGAAGAAGacgacgaagaagaagaagaagaagaaaatgaaaactaCCCTTTGAAACTTGAACGATTTACAATTGACAAATTAACCAACTTGGCAGTATTACCTAGTTGGCTTAGAAGATGCGGCAAAACGTTGAGGTATCTCGGCCTTTCAGAGTGTTCGAGCCTAATGGCATTGCCAGAATGGTTAGTAAATCTAACATCACTCGAGACGCTTCTAATTGCTGATTGTCGAAACTTGTCATTACCACAGCATATGGATCGTCTTCAAAACCTTCAGAATTTAAAGATATACGGATGTCCTAAGCTAATTGAGAGGTGCAAACAAAATACAGGCAGTGACTGGTACAAGATAGCTCATATCCCAAATGTTGAACTTGGCAGCGATTAG 2541 0.3518 MAKGLHNDVTNLQNNLTIINAFILDAENKQTQSNSISLWLHQLKYALFDARDVLDEIECESLRNHVVKTKGNFNTKVQRFLSFSSNPFAFRVKMANKIKDVNHKIDEICNLRMKLGLSVSVNHASGSGNDNSSIRIRTKRETHSYVKSSHVIGRDEEKEKIIRFLMDPPLVDDDNDDDIGVIPVVGIGGLGKTTLAQLVYNDDRVIEFFELRMWVYVSDEFDVKRLVSEILKAMHGMEVDAQMHSFDYLQNLLRERLRGTKFLLVLDDVWNEDYREWLELKKLLIGMNDDKDGNKLGNKIITTTRSDRVASIMGNANKHNLKYLPEEECLRLFVKHAFSAGEEKRYPRLVEIGKDIARKCKGLPLAVVSLGCLLYNRVDESEWKKVRDSDIWKVNPQDDGGILAALKLSYNHLSPGLKQCFSYCSIFPKGYEYTNLELISFWMAHGLLQTRNEDEEPEEVGEFYIQELVSRSFFECASEEQLVIDGLISEELDLLGISFFKTHDLIHDLAVFTMQNERKVVKFNSTNIQEKVQHLSFSDSGEGVPAFGKMSRKIRTIGFWHAFQKELAITEPFVKWISNKFKYLRVLNIQGSDFQFLPECFDKMKHLRYLDLSYCRKLEKLPDSICKLQSLEILNLWKCIALAYIPPKLRNLVSLRILWITITITDLSFIGIGNLKNLQILILWNCDNLVSLPRDLRHLTSLKRLTIEACDEVISFDDEEDDEEEEEEENENYPLKLERFTIDKLTNLAVLPSWLRRCGKTLRYLGLSECSSLMALPEWLVNLTSLETLLIADCRNLSLPQHMDRLQNLQNLKIYGCPKLIERCKQNTGSDWYKIAHIPNVELGSD 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01482 846 Gene3D - 1 106 - -
Tsu02g01482 846 Pfam NB-ARC domain 176 411 IPR002182 GO:0043531
Tsu02g01482 846 SUPERFAMILY L domain-like 502 835 - -
Tsu02g01482 846 Pfam Rx N-terminal domain 3 70 IPR041118 -
Tsu02g01482 846 Gene3D - 135 319 IPR027417 -
Tsu02g01482 846 PANTHER DISEASE RESISTANCE PROTEIN RP 10 824 IPR044974 GO:0006952
Tsu02g01482 846 Gene3D Ribonuclease Inhibitor 735 830 IPR032675 -
Tsu02g01482 846 PANTHER OS05G0414200 PROTEIN 10 824 - -
Tsu02g01482 846 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 424 IPR027417 -
Tsu02g01482 846 Gene3D - 404 511 IPR036388 -
Tsu02g01482 846 Gene3D Ribonuclease Inhibitor 565 717 IPR032675 -
Tsu02g01482 846 PRINTS Disease resistance protein signature 602 618 - -
Tsu02g01482 846 PRINTS Disease resistance protein signature 181 196 - -
Tsu02g01482 846 PRINTS Disease resistance protein signature 256 270 - -
Tsu02g01482 846 PRINTS Disease resistance protein signature 360 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01482 Tsu-Chr2 13088048 13091708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01482 178 816 WRKY Transcription Factor Family AT5G45050 22.511 2.91e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01482 - - cam:101500245 1324.3